diff --git a/lib/doc/UserGuide.lyx b/lib/doc/UserGuide.lyx
index 1dcc9874da..f3252509ef 100644
--- a/lib/doc/UserGuide.lyx
+++ b/lib/doc/UserGuide.lyx
@@ -75,7 +75,7 @@ enumitem
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \paperfontsize 12
 \spacing single
diff --git a/lib/doc/attic/eu_UserGuide.lyx b/lib/doc/attic/eu_UserGuide.lyx
index d24805f125..bed3078211 100644
--- a/lib/doc/attic/eu_UserGuide.lyx
+++ b/lib/doc/attic/eu_UserGuide.lyx
@@ -69,7 +69,7 @@
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \paperfontsize 12
 \spacing single
diff --git a/lib/doc/es/UserGuide.lyx b/lib/doc/es/UserGuide.lyx
index cc4d96fddf..bffdf86720 100644
--- a/lib/doc/es/UserGuide.lyx
+++ b/lib/doc/es/UserGuide.lyx
@@ -75,7 +75,7 @@ enumitem
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \paperfontsize 12
 \spacing single
diff --git a/lib/doc/fr/UserGuide.lyx b/lib/doc/fr/UserGuide.lyx
index b17080818c..47812810f5 100644
--- a/lib/doc/fr/UserGuide.lyx
+++ b/lib/doc/fr/UserGuide.lyx
@@ -79,7 +79,7 @@ logicalmkup
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \paperfontsize 12
 \spacing single
diff --git a/lib/doc/id/UserGuide.lyx b/lib/doc/id/UserGuide.lyx
index b9f4ad287a..3c05f0cab4 100644
--- a/lib/doc/id/UserGuide.lyx
+++ b/lib/doc/id/UserGuide.lyx
@@ -80,7 +80,7 @@ enumitem
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \paperfontsize 12
 \spacing single
diff --git a/lib/doc/ja/UserGuide.lyx b/lib/doc/ja/UserGuide.lyx
index 9393aec3c0..0c4c136b58 100644
--- a/lib/doc/ja/UserGuide.lyx
+++ b/lib/doc/ja/UserGuide.lyx
@@ -116,7 +116,7 @@ End
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \paperfontsize default
 \spacing single
diff --git a/lib/examples/ACM-siggraph.lyx b/lib/examples/ACM-siggraph.lyx
index 7fcae18477..0369f3b838 100644
--- a/lib/examples/ACM-siggraph.lyx
+++ b/lib/examples/ACM-siggraph.lyx
@@ -23,7 +23,7 @@
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \paperfontsize default
 \spacing single
diff --git a/lib/examples/AEA.lyx b/lib/examples/AEA.lyx
index a6c5ad05bf..2ceb5482b8 100644
--- a/lib/examples/AEA.lyx
+++ b/lib/examples/AEA.lyx
@@ -32,7 +32,7 @@
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \paperfontsize default
 \spacing single
diff --git a/lib/examples/JASA.lyx b/lib/examples/JASA.lyx
index 9e7b0b1cbd..9b79e28303 100644
--- a/lib/examples/JASA.lyx
+++ b/lib/examples/JASA.lyx
@@ -23,7 +23,7 @@
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \paperfontsize default
 \spacing single
diff --git a/lib/examples/aa_sample.lyx b/lib/examples/aa_sample.lyx
index af0b272a58..61b88d9d21 100644
--- a/lib/examples/aa_sample.lyx
+++ b/lib/examples/aa_sample.lyx
@@ -22,7 +22,7 @@
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \paperfontsize default
 \spacing single
diff --git a/lib/examples/achemso.lyx b/lib/examples/achemso.lyx
index 62545a4eb0..4db43140a6 100644
--- a/lib/examples/achemso.lyx
+++ b/lib/examples/achemso.lyx
@@ -32,7 +32,7 @@ theorems-ams
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \paperfontsize default
 \spacing single
diff --git a/lib/examples/de/tufte-handout.lyx b/lib/examples/de/tufte-handout.lyx
index 6e7c86380b..a0187aa53f 100644
--- a/lib/examples/de/tufte-handout.lyx
+++ b/lib/examples/de/tufte-handout.lyx
@@ -22,7 +22,7 @@
 \graphics default
 \default_output_format pdf2
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \paperfontsize default
 \spacing single
diff --git a/lib/examples/es/europeCV.lyx b/lib/examples/es/europeCV.lyx
index cc75bc994a..aba7b2379c 100644
--- a/lib/examples/es/europeCV.lyx
+++ b/lib/examples/es/europeCV.lyx
@@ -54,7 +54,7 @@
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \paperfontsize 10
 \spacing single
diff --git a/lib/examples/es/modernCV.lyx b/lib/examples/es/modernCV.lyx
index fc6c866b04..db02d2144e 100644
--- a/lib/examples/es/modernCV.lyx
+++ b/lib/examples/es/modernCV.lyx
@@ -64,7 +64,7 @@
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \paperfontsize 12
 \spacing single
diff --git a/lib/examples/es/tufte-book.lyx b/lib/examples/es/tufte-book.lyx
index b39a2b34c0..b8e3bbfda5 100644
--- a/lib/examples/es/tufte-book.lyx
+++ b/lib/examples/es/tufte-book.lyx
@@ -26,7 +26,7 @@
 \graphics default
 \default_output_format pdf2
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \paperfontsize default
 \spacing single
diff --git a/lib/examples/es/tufte-handout.lyx b/lib/examples/es/tufte-handout.lyx
index e989a892cf..1c6d166b4a 100644
--- a/lib/examples/es/tufte-handout.lyx
+++ b/lib/examples/es/tufte-handout.lyx
@@ -22,7 +22,7 @@
 \graphics default
 \default_output_format pdf2
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \paperfontsize default
 \spacing single
diff --git a/lib/examples/europeCV.lyx b/lib/examples/europeCV.lyx
index 76da609b58..10641117fe 100644
--- a/lib/examples/europeCV.lyx
+++ b/lib/examples/europeCV.lyx
@@ -28,7 +28,7 @@
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \paperfontsize 10
 \spacing single
diff --git a/lib/examples/modernCV.lyx b/lib/examples/modernCV.lyx
index 43f7a931cc..7385bfde91 100644
--- a/lib/examples/modernCV.lyx
+++ b/lib/examples/modernCV.lyx
@@ -31,7 +31,7 @@
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \paperfontsize 12
 \spacing single
diff --git a/lib/examples/springer/svjour3.lyx b/lib/examples/springer/svjour3.lyx
index 5df350d7ab..f1b5557a9f 100644
--- a/lib/examples/springer/svjour3.lyx
+++ b/lib/examples/springer/svjour3.lyx
@@ -27,7 +27,7 @@
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \paperfontsize default
 \spacing single
diff --git a/lib/examples/thesis/Appendix.lyx b/lib/examples/thesis/Appendix.lyx
index 77bec1c8fb..e5a092b224 100644
--- a/lib/examples/thesis/Appendix.lyx
+++ b/lib/examples/thesis/Appendix.lyx
@@ -81,7 +81,7 @@ customHeadersFooters
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \float_placement h
 \paperfontsize 12
diff --git a/lib/examples/thesis/chapter-1.lyx b/lib/examples/thesis/chapter-1.lyx
index 8e1a206ed8..7bf04bf9d1 100644
--- a/lib/examples/thesis/chapter-1.lyx
+++ b/lib/examples/thesis/chapter-1.lyx
@@ -81,7 +81,7 @@ customHeadersFooters
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \float_placement h
 \paperfontsize 12
diff --git a/lib/examples/thesis/chapter-2.lyx b/lib/examples/thesis/chapter-2.lyx
index d2c09d1666..2af19c945f 100644
--- a/lib/examples/thesis/chapter-2.lyx
+++ b/lib/examples/thesis/chapter-2.lyx
@@ -81,7 +81,7 @@ customHeadersFooters
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \float_placement h
 \paperfontsize 12
diff --git a/lib/examples/thesis/thesis.lyx b/lib/examples/thesis/thesis.lyx
index 898652dd38..1d6b00529a 100644
--- a/lib/examples/thesis/thesis.lyx
+++ b/lib/examples/thesis/thesis.lyx
@@ -80,7 +80,7 @@ customHeadersFooters
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \float_placement h
 \paperfontsize 12
diff --git a/lib/examples/tufte-book.lyx b/lib/examples/tufte-book.lyx
index 0cb2691d8a..1d032c6dfe 100644
--- a/lib/examples/tufte-book.lyx
+++ b/lib/examples/tufte-book.lyx
@@ -22,7 +22,7 @@
 \graphics default
 \default_output_format pdf2
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \paperfontsize default
 \spacing single
diff --git a/lib/examples/tufte-handout.lyx b/lib/examples/tufte-handout.lyx
index 67c809d84b..0bb96fe09f 100644
--- a/lib/examples/tufte-handout.lyx
+++ b/lib/examples/tufte-handout.lyx
@@ -22,7 +22,7 @@
 \graphics default
 \default_output_format pdf2
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \paperfontsize default
 \spacing single
diff --git a/lib/templates/ACM-sigplan.lyx b/lib/templates/ACM-sigplan.lyx
index d478e22f50..f15c3594c0 100644
--- a/lib/templates/ACM-sigplan.lyx
+++ b/lib/templates/ACM-sigplan.lyx
@@ -23,7 +23,7 @@
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \float_placement tbh
 \paperfontsize default
diff --git a/lib/templates/AGUTeX.lyx b/lib/templates/AGUTeX.lyx
index 00a4c1fc3f..2935214b29 100644
--- a/lib/templates/AGUTeX.lyx
+++ b/lib/templates/AGUTeX.lyx
@@ -60,7 +60,7 @@ theorems-std
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \paperfontsize default
 \spacing single
diff --git a/lib/templates/APA.lyx b/lib/templates/APA.lyx
index c07f6aefcb..a2b0c8ecb2 100644
--- a/lib/templates/APA.lyx
+++ b/lib/templates/APA.lyx
@@ -45,7 +45,7 @@
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \paperfontsize default
 \spacing single
diff --git a/lib/templates/APA6.lyx b/lib/templates/APA6.lyx
index fbca6607c5..7e2b6278b3 100644
--- a/lib/templates/APA6.lyx
+++ b/lib/templates/APA6.lyx
@@ -34,7 +34,7 @@ End
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \paperfontsize default
 \spacing single
diff --git a/lib/templates/IEEEtran-CompSoc.lyx b/lib/templates/IEEEtran-CompSoc.lyx
index 6032c36090..487d4e9de3 100644
--- a/lib/templates/IEEEtran-CompSoc.lyx
+++ b/lib/templates/IEEEtran-CompSoc.lyx
@@ -28,7 +28,7 @@
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \float_placement tbh
 \paperfontsize default
diff --git a/lib/templates/IEEEtran-Conference.lyx b/lib/templates/IEEEtran-Conference.lyx
index bc7736875e..b6952c2d9f 100644
--- a/lib/templates/IEEEtran-Conference.lyx
+++ b/lib/templates/IEEEtran-Conference.lyx
@@ -27,7 +27,7 @@
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \float_placement tbh
 \paperfontsize default
diff --git a/lib/templates/IEEEtran-Journal.lyx b/lib/templates/IEEEtran-Journal.lyx
index c4b554d710..3f797edb3c 100644
--- a/lib/templates/IEEEtran-Journal.lyx
+++ b/lib/templates/IEEEtran-Journal.lyx
@@ -27,7 +27,7 @@
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \float_placement tbh
 \paperfontsize default
diff --git a/lib/templates/IEEEtran-TransMag.lyx b/lib/templates/IEEEtran-TransMag.lyx
index 7ecd763d35..9ffa62ce68 100644
--- a/lib/templates/IEEEtran-TransMag.lyx
+++ b/lib/templates/IEEEtran-TransMag.lyx
@@ -28,7 +28,7 @@
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \float_placement tbh
 \paperfontsize default
diff --git a/lib/templates/IOP-article.lyx b/lib/templates/IOP-article.lyx
index 36fb654905..94a088ea38 100644
--- a/lib/templates/IOP-article.lyx
+++ b/lib/templates/IOP-article.lyx
@@ -33,7 +33,7 @@
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \paperfontsize default
 \spacing single
diff --git a/lib/templates/RJournal.lyx b/lib/templates/RJournal.lyx
index 4c3d7d6b76..e08e471522 100644
--- a/lib/templates/RJournal.lyx
+++ b/lib/templates/RJournal.lyx
@@ -25,7 +25,7 @@ knitr
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \paperfontsize default
 \spacing single
diff --git a/lib/templates/elsarticle.lyx b/lib/templates/elsarticle.lyx
index 9f97348c5c..9e55b58d70 100644
--- a/lib/templates/elsarticle.lyx
+++ b/lib/templates/elsarticle.lyx
@@ -31,7 +31,7 @@ theorems-std
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \paperfontsize default
 \spacing single
diff --git a/lib/templates/revtex4-1.lyx b/lib/templates/revtex4-1.lyx
index 52df2568ef..fb6f626b40 100644
--- a/lib/templates/revtex4-1.lyx
+++ b/lib/templates/revtex4-1.lyx
@@ -23,7 +23,7 @@
 \graphics default
 \default_output_format default
 \output_sync 0
-\bibtex_command default
+\bibtex_command bibtex
 \index_command default
 \paperfontsize default
 \spacing single