#LyX 2.2 created this file. For more info see http://www.lyx.org/
\lyxformat 495
\begin_document
\begin_header
\origin unavailable
\textclass jss
\begin_preamble
%the following commands are used only for book or software reviews

%\Reviewer{Some Author\\University of Somewhere}
%\Plainreviewer{Some Author}

%the following commands are used for articles, codesnippets, book reviews and software reviews

%publication information
%do not use these commands before the article has been accepted
%\Volume{00}
%\Issue{0}
%\Month{Month}
%\Year{2000}
%\Submitdate{2000-00-00}
%\Acceptdate{2000-00-00}

%if you use Sweave,  include the following line (with % symbols):
%% need no \usepackage{Sweave.sty}
\end_preamble
\options article
\use_default_options false
\maintain_unincluded_children false
\language english
\language_package default
\inputencoding auto
\fontencoding global
\font_roman default
\font_sans default
\font_typewriter default
\font_math auto
\font_default_family default
\use_non_tex_fonts false
\font_sc false
\font_osf false
\font_sf_scale 100
\font_tt_scale 100
\graphics default
\default_output_format pdf2
\output_sync 0
\bibtex_command default
\index_command default
\paperfontsize default
\spacing single
\use_hyperref false
\papersize default
\use_geometry false
\use_package amsmath 0
\use_package amssymb 0
\use_package cancel 0
\use_package esint 0
\use_package mathdots 1
\use_package mathtools 0
\use_package mhchem 1
\use_package stackrel 0
\use_package stmaryrd 0
\use_package undertilde 0
\cite_engine natbib
\cite_engine_type authoryear
\biblio_style plainnat
\use_bibtopic false
\use_indices false
\paperorientation portrait
\suppress_date false
\justification true
\use_refstyle 0
\index Index
\shortcut idx
\color #008000
\end_index
\secnumdepth 3
\tocdepth 3
\paragraph_separation indent
\paragraph_indentation default
\quotes_language english
\papercolumns 1
\papersides 1
\paperpagestyle default
\tracking_changes false
\output_changes false
\html_math_output 0
\html_css_as_file 0
\html_be_strict false
\end_header

\begin_body

\begin_layout Standard
\begin_inset Note Note
status open

\begin_layout Plain Layout
This is a template \SpecialChar LyX
 file for articles to be submitted to the Journal of
 Statistical Software (JSS).
 How to install the JSS \SpecialChar LaTeX
 class to your \SpecialChar LaTeX
 system is explained in 
\begin_inset Flex URL
status open

\begin_layout Plain Layout

http://wiki.lyx.org/Layouts/JSS
\end_layout

\end_inset

.
\end_layout

\end_inset


\begin_inset Note Note
status open

\begin_layout Plain Layout
To use the JSS codesnippet, bookreview or softwarereview styles, replace
 the option 
\begin_inset Quotes eld
\end_inset

article
\begin_inset Quotes erd
\end_inset

 in Document\SpecialChar menuseparator
Settings\SpecialChar menuseparator
Document Class\SpecialChar menuseparator
Options with 
\begin_inset Quotes eld
\end_inset

codesnippet
\begin_inset Quotes erd
\end_inset

, 
\begin_inset Quotes eld
\end_inset

bookreview
\begin_inset Quotes erd
\end_inset

 or 
\begin_inset Quotes eld
\end_inset

softwarereview
\begin_inset Quotes erd
\end_inset

 and remove/uncomment the relevant parts in the \SpecialChar LaTeX
 Preamble.
 
\end_layout

\begin_layout Plain Layout
If you want to use this JSS article style for a non-JSS article, replace
 the option 
\begin_inset Quotes eld
\end_inset

article
\begin_inset Quotes erd
\end_inset

 with 
\begin_inset Quotes eld
\end_inset

nojss
\begin_inset Quotes erd
\end_inset

.
 This will suppress the JSS-specific parts of the layout.
\end_layout

\begin_layout Plain Layout
To include the JSS-specific parts of the layout, the article has to be processed
 with PDF, i.
\begin_inset space \thinspace{}
\end_inset

e.
\begin_inset space ~
\end_inset

you cannot process it with DVI or PS.
 However, if the option 
\begin_inset Quotes eld
\end_inset

nojss
\begin_inset Quotes erd
\end_inset

 is used, it can be processed with DVI or PS.
\end_layout

\end_inset


\end_layout

\begin_layout Title
A Capitalized Title: Something about a Package 
\begin_inset Flex pkg
status open

\begin_layout Plain Layout
foo
\end_layout

\end_inset


\end_layout

\begin_layout Plain Title
A Capitalized Title: Something about a Package foo
\begin_inset Note Note
status open

\begin_layout Plain Layout
optional
\end_layout

\end_inset


\end_layout

\begin_layout Author
Achim Zeileis
\begin_inset Newline newline
\end_inset

Universität Innsbruck 
\begin_inset ERT
status collapsed

\begin_layout Plain Layout


\backslash
And 
\end_layout

\end_inset

Second Author
\begin_inset Newline newline
\end_inset

Plus Affiliation
\end_layout

\begin_layout Plain Author
Achim Zeileis, Second Author
\begin_inset Note Note
status open

\begin_layout Plain Layout
optional
\end_layout

\end_inset


\end_layout

\begin_layout Short Title
\begin_inset Flex pkg
status open

\begin_layout Plain Layout
foo
\end_layout

\end_inset

: A Capitalized Title
\begin_inset Note Note
status collapsed

\begin_layout Plain Layout
only if necessary
\end_layout

\end_inset


\end_layout

\begin_layout Abstract
\noindent
The abstract of the article.
 The abstract of the article.The abstract of the article.The abstract of the
 article.The abstract of the article.The abstract of the article.The abstract
 of the article.The abstract of the article.The abstract of the article.The
 abstract of the article.The abstract of the article.The abstract of the article.Th
e abstract of the article.The abstract of the article.The abstract of the
 article.The abstract of the article.The abstract of the article.
\end_layout

\begin_layout Keywords
keywords, comma-separated, not capitalized, 
\begin_inset Flex proglang
status open

\begin_layout Plain Layout
Java
\end_layout

\end_inset


\begin_inset Note Note
status open

\begin_layout Plain Layout
at least one keyword must be supplied
\end_layout

\end_inset


\end_layout

\begin_layout Plain Keywords
keyword 1, keyword 2, foo, R
\end_layout

\begin_layout Address
Achim Zeileis
\begin_inset Newline newline
\end_inset

Department of Statistics and Mathematics
\begin_inset Newline newline
\end_inset

Faculty of Economics and Statistics
\begin_inset Newline newline
\end_inset

Universität Innsbruck
\begin_inset Newline newline
\end_inset

6020 Innsbruck, Austria
\begin_inset Newline newline
\end_inset

E-mail: 
\begin_inset Flex E-mail
status open

\begin_layout Plain Layout

Achim.Zeileis@uibk.ac.at
\end_layout

\end_inset


\begin_inset Newline newline
\end_inset

URL: 
\begin_inset Flex URL
status open

\begin_layout Plain Layout

http://eeecon.uibk.ac.at/~zeileis/
\end_layout

\end_inset


\begin_inset Note Note
status open

\begin_layout Plain Layout
It is also possible to add a telephone and fax number before the e-mail
 in the following format:
\begin_inset Newline newline
\end_inset

Telephone: +43/512/507-7103
\end_layout

\begin_layout Plain Layout
Fax: +43/512/507-2851
\end_layout

\end_inset


\end_layout

\begin_layout Section
About package 
\begin_inset Flex pkg
status open

\begin_layout Plain Layout
foo
\end_layout

\end_inset

 in 
\begin_inset Flex proglang
status open

\begin_layout Plain Layout
R
\end_layout

\end_inset


\begin_inset Argument 1
status open

\begin_layout Plain Layout
About package foo in R
\end_layout

\end_inset


\begin_inset Note Note
status collapsed

\begin_layout Plain Layout
The short title provides bookmarks for PDF files
\end_layout

\end_inset


\end_layout

\begin_layout Standard
The special JSS style commands related to software and mathematical formulas
 are written as follows in \SpecialChar LyX
: 
\begin_inset Flex proglang
status open

\begin_layout Plain Layout
R
\end_layout

\end_inset

 or 
\begin_inset Flex proglang
status open

\begin_layout Plain Layout
R
\end_layout

\end_inset

 for the names of programming languages, 
\begin_inset Flex pkg
status open

\begin_layout Plain Layout
foo
\end_layout

\end_inset

 or 
\begin_inset Flex pkg
status open

\begin_layout Plain Layout
foo
\end_layout

\end_inset

 for software packages, and 
\begin_inset Flex code
status open

\begin_layout Plain Layout
some code
\end_layout

\end_inset

 or 
\begin_inset Flex pkg
status open

\begin_layout Plain Layout
some code
\end_layout

\end_inset

 for code; 
\begin_inset Formula $\E$
\end_inset

 
\begin_inset Note Note
status collapsed

\begin_layout Plain Layout
written as 
\backslash
E
\end_layout

\end_inset

 for expectations, 
\begin_inset Formula $\VAR$
\end_inset

 
\begin_inset Note Note
status collapsed

\begin_layout Plain Layout
written as 
\backslash
VAR
\end_layout

\end_inset

 for variances, 
\begin_inset Formula $\COV$
\end_inset

 
\begin_inset Note Note
status collapsed

\begin_layout Plain Layout
written as 
\backslash
COV
\end_layout

\end_inset

 for covariances, and 
\begin_inset Formula $\Prob$
\end_inset

 
\begin_inset Note Note
status collapsed

\begin_layout Plain Layout
written as 
\backslash
Prob
\end_layout

\end_inset

 for probabilities.
\end_layout

\begin_layout Standard
Writing several lines of code:
\end_layout

\begin_layout Code Chunk

\end_layout

\begin_deeper
\begin_layout Standard Code
first line of code
\end_layout

\begin_layout Standard Code
second line of code
\end_layout

\begin_layout Standard Code
third line of code
\end_layout

\end_deeper
\begin_layout Standard
Alternatively, you can distinguish between input and output code:
\end_layout

\begin_layout Code Chunk

\end_layout

\begin_deeper
\begin_layout Code Input
first line of input code
\end_layout

\begin_layout Code Input
second line of input code
\end_layout

\begin_layout Code Output
first line of output code
\end_layout

\begin_layout Code Output
second line of output code
\end_layout

\begin_layout Code Output
third line of output code
\end_layout

\end_deeper
\begin_layout Section*
Acknowledgments
\end_layout

\begin_layout Standard
Here you can write some acknowledgments.
\end_layout

\begin_layout Section
\start_of_appendix
This is the first appendix section
\end_layout

\begin_layout Subsection
A subsection
\end_layout

\begin_layout Subsubsection
A subsubsection
\end_layout

\begin_layout Standard
some text
\end_layout

\end_body
\end_document