mirror of
https://git.lyx.org/repos/lyx.git
synced 2024-11-07 12:32:26 +00:00
a15303b938
Especially after the change to use semantic linefeeds (7b23c76b),
the diffs are large and it's hard to figure out what diff is the
result of the linefeed change and which diff is the result of an
edit.
By updating the docs, it will make the edits easier to understand
from the diff.
This commit used the LyX binary to write the new .lyx files since
lyx2lyx does not apply semantic linefeeds.
I used the following command:
./development/tools/updatedocs.py [path to 'lyx' binary]
A few documents were not updated (e.g., the command sequence used
failed because a dialog about a missing dependency was shown).
I did not update Additional.lyx for any language since it is
undergoing changes. I also didn't change anything in doc/fr since JP
is working on some of those. I also didn't change doc/ru since it
appears Yuriy already updated those.
421 lines
5.9 KiB
Plaintext
421 lines
5.9 KiB
Plaintext
#LyX 2.4 created this file. For more info see https://www.lyx.org/
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\lyxformat 612
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\begin_document
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\begin_header
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\save_transient_properties true
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\origin /systemlyxdir/templates/Articles/
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\textclass RJournal
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\use_default_options true
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\begin_modules
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knitr
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\end_modules
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\maintain_unincluded_children no
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\language english
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\language_package default
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\inputencoding utf8
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\fontencoding auto
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\font_roman "default" "default"
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\font_sans "default" "default"
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\font_typewriter "default" "default"
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\font_math "auto" "auto"
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\font_default_family default
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\use_non_tex_fonts false
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\font_sc false
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\font_roman_osf false
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\font_sans_osf false
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\font_typewriter_osf false
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\font_sf_scale 100 100
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\font_tt_scale 100 100
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\use_microtype false
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\use_dash_ligatures false
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\graphics default
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\default_output_format default
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\output_sync 0
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\bibtex_command bibtex
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\index_command default
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\paperfontsize default
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\spacing single
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\use_hyperref false
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\papersize default
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\use_geometry false
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\use_package amsmath 1
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\use_package amssymb 1
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\use_package cancel 1
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\use_package esint 1
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\use_package mathdots 1
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\use_package mathtools 1
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\use_package mhchem 1
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\use_package stackrel 1
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\use_package stmaryrd 1
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\use_package undertilde 1
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\cite_engine natbib
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\cite_engine_type authoryear
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\biblio_style plainnat
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\use_bibtopic false
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\use_indices false
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\paperorientation portrait
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\suppress_date false
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\justification true
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\use_refstyle 1
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\use_minted 0
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\use_lineno 0
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\index Index
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\shortcut idx
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\color #008000
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\end_index
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\secnumdepth 3
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\tocdepth 3
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\paragraph_separation indent
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\paragraph_indentation default
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\is_math_indent 0
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\math_numbering_side default
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\quotes_style english
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\dynamic_quotes 0
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\papercolumns 1
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\papersides 1
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\paperpagestyle default
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\tablestyle default
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\tracking_changes false
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\output_changes false
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\change_bars false
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\postpone_fragile_content false
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\html_math_output 0
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\html_css_as_file 0
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\html_be_strict false
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\docbook_table_output 0
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\docbook_mathml_prefix 1
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\end_header
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\begin_body
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\begin_layout Standard
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\begin_inset Note Note
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status open
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\begin_layout Plain Layout
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This document requires the LaTeX style file
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\begin_inset Quotes eld
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\end_inset
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RJournal.sty
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\begin_inset Quotes erd
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\end_inset
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.
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\end_layout
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\begin_layout Plain Layout
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See
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\begin_inset Flex URL
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status open
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\begin_layout Plain Layout
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https://journal.r-project.org/submissions.html
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\end_layout
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\end_inset
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\end_layout
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\end_inset
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\begin_inset ERT
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status open
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\begin_layout Plain Layout
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<<setup,
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include=FALSE>>=
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\end_layout
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\begin_layout Plain Layout
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render_sweave() # use Schunk,
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Sinput and Soutput environments defined by RJournal
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\end_layout
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\begin_layout Plain Layout
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set_header(highlight = '') # no need for
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\backslash
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usepackage{Sweave}
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\end_layout
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\begin_layout Plain Layout
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@
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\end_layout
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\end_inset
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\end_layout
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\begin_layout Title
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Capitalized Title Here
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\end_layout
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\begin_layout Author
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by Author A and Author B
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\end_layout
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\begin_layout Abstract
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An abstract of less than 150 words.
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\end_layout
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\begin_layout Section
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Section title in sentence case
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\end_layout
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\begin_layout Standard
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Write something here.
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A sample citation is
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\begin_inset CommandInset citation
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LatexCommand citet
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key "article-minimal"
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literal "true"
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\end_inset
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.
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\end_layout
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\begin_layout Section
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R code chunks
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\end_layout
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\begin_layout Standard
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Press
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\begin_inset Info
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type "shortcut"
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arg "ert-insert"
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\end_inset
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and input R code chunks which will be compiled with the
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\series bold
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knitr
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\series default
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package (
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\begin_inset Flex URL
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status collapsed
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\begin_layout Plain Layout
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http://yihui.name/knitr/
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\end_layout
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\end_inset
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).
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\end_layout
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\begin_layout Standard
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\begin_inset ERT
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status open
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\begin_layout Plain Layout
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<<sample-chunk,
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echo=TRUE>>=
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\end_layout
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\begin_layout Plain Layout
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x=1:10
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\end_layout
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\begin_layout Plain Layout
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rev(x)
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\end_layout
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\begin_layout Plain Layout
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summary(x)
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\end_layout
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\begin_layout Plain Layout
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@
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\end_layout
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\end_inset
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\end_layout
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\begin_layout Standard
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You can also plot your data;
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see Figure
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\begin_inset CommandInset ref
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LatexCommand ref
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reference "fig:sample-figure"
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nolink "false"
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\end_inset
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for example.
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\end_layout
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\begin_layout Standard
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\begin_inset Float figure
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placement tbph
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alignment document
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wide false
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sideways false
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status open
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\begin_layout Plain Layout
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\begin_inset ERT
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status open
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\begin_layout Plain Layout
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<<sample-figure,
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fig.width=5,
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fig.height=3,
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out.width='.4
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\backslash
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\backslash
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linewidth',
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fig.align='center',
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dev=c('pdf','postscript')>>=
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\end_layout
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\begin_layout Plain Layout
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par(mar = c(4,4,.1,.1))
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\end_layout
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\begin_layout Plain Layout
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plot(x,
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pch=19,
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col=1:10)
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\end_layout
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\begin_layout Plain Layout
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@
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\end_layout
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\end_inset
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\end_layout
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\begin_layout Plain Layout
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\begin_inset Caption Standard
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\begin_layout Plain Layout
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A sample figure.
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\begin_inset CommandInset label
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LatexCommand label
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name "fig:sample-figure"
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\end_inset
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\end_layout
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\end_inset
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\end_layout
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\end_inset
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\end_layout
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\begin_layout Standard
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\begin_inset Note Note
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status open
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\begin_layout Plain Layout
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When you insert a Bib\SpecialChar TeX
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bibliography here,
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do not use any bib styles.
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The R Journal has declared the style to be
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\begin_inset Quotes eld
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\end_inset
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abbrvnat
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\begin_inset Quotes erd
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\end_inset
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.
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\end_layout
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\end_inset
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\end_layout
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\begin_layout Standard
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\begin_inset CommandInset bibtex
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LatexCommand bibtex
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bibfiles "xampl"
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\end_inset
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\end_layout
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\begin_layout Address
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Author A
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\begin_inset Newline newline
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\end_inset
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Press
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\begin_inset Info
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type "shortcut"
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arg "newline-insert newline"
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\end_inset
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to input
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\begin_inset Newline newline
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\end_inset
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address here
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\begin_inset Newline newline
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\end_inset
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\begin_inset Flex Email
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status open
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\begin_layout Plain Layout
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author.a@email
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\end_layout
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\end_inset
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\end_layout
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\begin_layout Address
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Author B
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\begin_inset Newline newline
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\end_inset
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\begin_inset Flex Email
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status open
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\begin_layout Plain Layout
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author.b@email
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\end_layout
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\end_inset
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\end_layout
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\end_body
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\end_document
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