lyx_mirror/lib/templates/Articles/R_Journal.lyx
Richard Kimberly Heck 469168e592 Update documentation
2020-12-29 12:03:05 -05:00

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5.7 KiB
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#LyX 2.4 created this file. For more info see https://www.lyx.org/
\lyxformat 600
\begin_document
\begin_header
\save_transient_properties true
\origin /systemlyxdir/templates/Articles/
\textclass RJournal
\use_default_options true
\begin_modules
knitr
\end_modules
\maintain_unincluded_children no
\language english
\language_package default
\inputencoding utf8
\fontencoding auto
\font_roman "default" "default"
\font_sans "default" "default"
\font_typewriter "default" "default"
\font_math "auto" "auto"
\font_default_family default
\use_non_tex_fonts false
\font_sc false
\font_sans_osf false
\font_typewriter_osf false
\font_roman_osf false
\font_sf_scale 100 100
\font_tt_scale 100 100
\use_microtype false
\use_dash_ligatures false
\graphics default
\default_output_format default
\output_sync 0
\bibtex_command bibtex
\index_command default
\paperfontsize default
\spacing single
\use_hyperref false
\papersize default
\use_geometry false
\use_package amsmath 1
\use_package amssymb 1
\use_package cancel 1
\use_package esint 1
\use_package mathdots 1
\use_package mathtools 1
\use_package mhchem 1
\use_package stackrel 1
\use_package stmaryrd 1
\use_package undertilde 1
\cite_engine natbib
\cite_engine_type authoryear
\biblio_style plainnat
\use_bibtopic false
\use_indices false
\paperorientation portrait
\suppress_date false
\justification true
\use_refstyle 1
\use_minted 0
\use_lineno 0
\index Index
\shortcut idx
\color #008000
\end_index
\secnumdepth 3
\tocdepth 3
\paragraph_separation indent
\paragraph_indentation default
\is_math_indent 0
\math_numbering_side default
\quotes_style english
\dynamic_quotes 0
\papercolumns 1
\papersides 1
\paperpagestyle default
\tracking_changes false
\postpone_fragile_content false
\output_changes false
\html_math_output 0
\html_css_as_file 0
\html_be_strict false
\end_header
\begin_body
\begin_layout Standard
\begin_inset Note Note
status open
\begin_layout Plain Layout
This document requires the LaTeX style file
\begin_inset Quotes eld
\end_inset
RJournal.sty
\begin_inset Quotes erd
\end_inset
.
\end_layout
\begin_layout Plain Layout
See
\begin_inset Flex URL
status open
\begin_layout Plain Layout
https://journal.r-project.org/submissions.html
\end_layout
\end_inset
\end_layout
\end_inset
\begin_inset ERT
status open
\begin_layout Plain Layout
<<setup, include=FALSE>>=
\end_layout
\begin_layout Plain Layout
render_sweave() # use Schunk, Sinput and Soutput environments defined by
RJournal
\end_layout
\begin_layout Plain Layout
set_header(highlight = '') # no need for
\backslash
usepackage{Sweave}
\end_layout
\begin_layout Plain Layout
@
\end_layout
\end_inset
\end_layout
\begin_layout Title
Capitalized Title Here
\end_layout
\begin_layout Author
by Author A and Author B
\end_layout
\begin_layout Abstract
An abstract of less than 150 words.
\end_layout
\begin_layout Section
Section title in sentence case
\end_layout
\begin_layout Standard
Write something here.
A sample citation is
\begin_inset CommandInset citation
LatexCommand citet
key "article-minimal"
literal "true"
\end_inset
.
\end_layout
\begin_layout Section
R code chunks
\end_layout
\begin_layout Standard
Press
\begin_inset Info
type "shortcut"
arg "ert-insert"
\end_inset
and input R code chunks which will be compiled with the
\series bold
knitr
\series default
package (
\begin_inset Flex URL
status collapsed
\begin_layout Plain Layout
http://yihui.name/knitr/
\end_layout
\end_inset
).
\end_layout
\begin_layout Standard
\begin_inset ERT
status open
\begin_layout Plain Layout
<<sample-chunk, echo=TRUE>>=
\end_layout
\begin_layout Plain Layout
x=1:10
\end_layout
\begin_layout Plain Layout
rev(x)
\end_layout
\begin_layout Plain Layout
summary(x)
\end_layout
\begin_layout Plain Layout
@
\end_layout
\end_inset
\end_layout
\begin_layout Standard
You can also plot your data; see Figure
\begin_inset CommandInset ref
LatexCommand ref
reference "fig:sample-figure"
\end_inset
for example.
\end_layout
\begin_layout Standard
\begin_inset Float figure
placement tbph
wide false
sideways false
status open
\begin_layout Plain Layout
\begin_inset ERT
status open
\begin_layout Plain Layout
<<sample-figure, fig.width=5, fig.height=3, out.width='.4
\backslash
\backslash
linewidth', fig.align='center', dev=c('pdf','postscript')>>=
\end_layout
\begin_layout Plain Layout
par(mar = c(4,4,.1,.1))
\end_layout
\begin_layout Plain Layout
plot(x, pch=19, col=1:10)
\end_layout
\begin_layout Plain Layout
@
\end_layout
\end_inset
\end_layout
\begin_layout Plain Layout
\begin_inset Caption Standard
\begin_layout Plain Layout
A sample figure.
\begin_inset CommandInset label
LatexCommand label
name "fig:sample-figure"
\end_inset
\end_layout
\end_inset
\end_layout
\end_inset
\end_layout
\begin_layout Standard
\begin_inset Note Note
status open
\begin_layout Plain Layout
When you insert a Bib\SpecialChar TeX
bibliography here, do not use any bib styles.
The R Journal has declared the style to be
\begin_inset Quotes eld
\end_inset
abbrvnat
\begin_inset Quotes erd
\end_inset
.
\end_layout
\end_inset
\end_layout
\begin_layout Standard
\begin_inset CommandInset bibtex
LatexCommand bibtex
bibfiles "xampl"
\end_inset
\end_layout
\begin_layout Address
Author A
\begin_inset Newline newline
\end_inset
Press
\begin_inset Info
type "shortcut"
arg "newline-insert newline"
\end_inset
to input
\begin_inset Newline newline
\end_inset
address here
\begin_inset Newline newline
\end_inset
\begin_inset Flex Email
status open
\begin_layout Plain Layout
author.a@email
\end_layout
\end_inset
\end_layout
\begin_layout Address
Author B
\begin_inset Newline newline
\end_inset
\begin_inset Flex Email
status open
\begin_layout Plain Layout
author.b@email
\end_layout
\end_inset
\end_layout
\end_body
\end_document