Merge branch 'develop' into rt_signalviewer

2023-02-20 09:38:42 +01:00 · 2023-02-20 09:38:42 +01:00 · cacfc7fe6c
parent c7045a81e9 78a94cec81
commit cacfc7fe6c
43 changed files with 1152 additions and 763 deletions
--- a/.drone.yml
+++ b/.drone.yml
@ -0,0 +1,110 @@
+kind: pipeline
+type: docker
+name: archlinux
+
+clone:
+  depth: 50
+
+steps:
+  - name: archlinux_build
+    image: archlinux_build:latest
+    pull: if-not-exists
+    volumes:
+    - name: archlinux_ccache
+      path: /root/.ccache
+    commands:
+    # The following command is not required, we included this in the docker 
+    # image of archlinux_build
+    # - pacman -S --noconfirm ccache openblas fftw pulseaudio pybind11
+    - git submodule update --init --recursive
+    - cmake .
+    # More than two makes ascee2 irresponsive for now
+    - make -j2
+
+  - name: archlinux_test
+    image: archlinux_build:latest
+    pull: if-not-exists
+    commands:
+    # The following command is not required, we included this in the docker 
+    # image of archlinux_build
+    # - pacman -S --noconfirm openblas python-pytest fftw pulseaudio python-pip python-scipy python-h5py
+    - pip install -r requirements.txt
+    - pip install .
+    - pytest
+
+      #  - name: release-arch
+      #    commands:
+      #    -
+
+volumes:
+  - name: archlinux_ccache
+    host:
+      path: /tmp/archlinux_ccache
+
+---
+kind: pipeline
+type: docker
+name: ubuntu
+
+clone:
+  depth: 3
+
+volumes:
+- name: archlinux_ccache
+  path: /root/.ccache
+
+steps:
+  - name: ubuntu_build
+    image: ubuntu_build:latest
+    pull: if-not-exists
+    volumes:
+    - name: ubuntu_ccache
+      path: /root/.ccache
+    commands:
+    # The following commands are not required, we included this in the docker 
+    # image of ubuntu_build
+    #- apt update
+    #- apt install -y git cmake python3-pybind11 libopenblas-dev python3-pip python3-scipy libusb-1.0-0-dev libpulse-dev python3-h5py fftw-dev
+    - git submodule update --init --recursive
+    - cmake .
+    # More than two makes ascee2 irresponsive for now
+    - make -j2
+
+  - name: ubuntu_test
+    image: ubuntu_build:latest
+    pull: if-not-exists
+    commands:
+    # The following commands are not required, we included this in the docker 
+    # image of ubuntu_build
+    #- apt update
+    #- apt install -y python3-pytest fftw pulseaudio python3-pip python3-scipy python3-h5py
+    - pip install -r requirements.txt
+    - pip install .
+    - pytest-3
+
+volumes:
+  - name: ubuntu_ccache
+    host:
+      path: /tmp/ubuntu_ccache
+
+---
+kind: pipeline
+type: docker
+name: documentation_build
+
+clone:
+  depth: 3
+
+
+steps:
+  - name: build_docker_master
+    image: plugins/docker
+    settings:
+      repo: ascee/lasp_ascee_nl
+      tags: latest
+      username:
+        from_secret: docker_username
+      password:
+        from_secret: docker_password
+      when:
+        branch: master
--- a/.gitignore
+++ b/.gitignore
@ -20,3 +20,4 @@ doc
 .spyproject
 .cache
 _skbuild
+acme_log.log
--- a/16
+++ b/16
@ -0,0 +1,16 @@
+FROM archlinux
+MAINTAINER J.A. de Jong - j.a.dejong@ascee.nl
+RUN pacman --noconfirm -Sy
+RUN pacman --noconfirm -S git doxygen graphviz lighttpd python-pip
+RUN pip install doxypypy
+WORKDIR /root
+RUN git clone https://code.ascee.nl/ascee/lasp
+WORKDIR /root/lasp
+RUN doxygen
+RUN rm -rf /srv//http
+RUN mv doc/html /srv/http
+CMD /usr/bin/lighttpd -D -f /etc/lighttpd/lighttpd.conf
+
+EXPOSE 80
+
+
--- a/360
+++ b/360
@ -1,4 +1,4 @@
-# Doxyfile 1.8.17
+# Doxyfile 1.9.1

 # This file describes the settings to be used by the documentation system
 # doxygen (www.doxygen.org) for a project.
@ -51,7 +51,7 @@ PROJECT_BRIEF          = "Library for Acoustic Signal Processing"
 # pixels and the maximum width should not exceed 200 pixels. Doxygen will copy
 # the logo to the output directory.

-PROJECT_LOGO           = /home/anne/wip/mycode/lasp/img/LASP_200px.png
+PROJECT_LOGO           = img/LASP_200px.png

 # The OUTPUT_DIRECTORY tag is used to specify the (relative or absolute) path
 # into which the generated documentation will be written. If a relative path is
@ -93,6 +93,14 @@ ALLOW_UNICODE_NAMES    = NO

 OUTPUT_LANGUAGE        = English

+# The OUTPUT_TEXT_DIRECTION tag is used to specify the direction in which all
+# documentation generated by doxygen is written. Doxygen will use this
+# information to generate all generated output in the proper direction.
+# Possible values are: None, LTR, RTL and Context.
+# The default value is: None.
+
+OUTPUT_TEXT_DIRECTION  = None
+
 # If the BRIEF_MEMBER_DESC tag is set to YES, doxygen will include brief member
 # descriptions after the members that are listed in the file and class
 # documentation (similar to Javadoc). Set to NO to disable this.
@ -225,7 +233,7 @@ MULTILINE_CPP_IS_BRIEF = NO
 # documentation blocks is shown as doxygen documentation.
 # The default value is: YES.

-PYTHON_DOCSTRING       = YES
+PYTHON_DOCSTRING       = NO

 # If the INHERIT_DOCS tag is set to YES then an undocumented member inherits the
 # documentation from any documented member that it re-implements.
@ -250,16 +258,16 @@ TAB_SIZE               = 4
 # the documentation. An alias has the form:
 # name=value
 # For example adding
-# "sideeffect=@par Side Effects:^^"
+# "sideeffect=@par Side Effects:\n"
 # will allow you to put the command \sideeffect (or @sideeffect) in the
 # documentation, which will result in a user-defined paragraph with heading
-# "Side Effects:". Note that you cannot put \n's in the value part of an alias
-# to insert newlines (in the resulting output). You can put ^^ in the value part
-# of an alias to insert a newline as if a physical newline was in the original
-# file. When you need a literal { or } or , in the value part of an alias you
-# have to escape them by means of a backslash (\), this can lead to conflicts
-# with the commands \{ and \} for these it is advised to use the version @{ and
-# @} or use a double escape (\\{ and \\})
+# "Side Effects:". You can put \n's in the value part of an alias to insert
+# newlines (in the resulting output). You can put ^^ in the value part of an
+# alias to insert a newline as if a physical newline was in the original file.
+# When you need a literal { or } or , in the value part of an alias you have to
+# escape them by means of a backslash (\), this can lead to conflicts with the
+# commands \{ and \} for these it is advised to use the version @{ and @} or use
+# a double escape (\\{ and \\})

 ALIASES                =

@ -304,8 +312,8 @@ OPTIMIZE_OUTPUT_SLICE  = NO
 # extension. Doxygen has a built-in mapping, but you can override or extend it
 # using this tag. The format is ext=language, where ext is a file extension, and
 # language is one of the parsers supported by doxygen: IDL, Java, JavaScript,
-# Csharp (C#), C, C++, Lex, D, PHP, md (Markdown), Objective-C, Python, Slice,
-# VHDL, Fortran (fixed format Fortran: FortranFixed, free formatted Fortran:
+# Csharp (C#), C, C++, D, PHP, md (Markdown), Objective-C, Python, Slice, VHDL,
+# Fortran (fixed format Fortran: FortranFixed, free formatted Fortran:
 # FortranFree, unknown formatted Fortran: Fortran. In the later case the parser
 # tries to guess whether the code is fixed or free formatted code, this is the
 # default for Fortran type files). For instance to make doxygen treat .inc files
@ -458,7 +466,7 @@ LOOKUP_CACHE_SIZE      = 0
 # than 0 to get more control over the balance between CPU load and processing
 # speed. At this moment only the input processing can be done using multiple
 # threads. Since this is still an experimental feature the default is set to 1,
-# which effectively disables parallel processing. Please report any issues you
+# which efficively disables parallel processing. Please report any issues you
 # encounter. Generating dot graphs in parallel is controlled by the
 # DOT_NUM_THREADS setting.
 # Minimum value: 0, maximum value: 32, default value: 1.
@ -602,12 +610,6 @@ HIDE_SCOPE_NAMES       = NO

 HIDE_COMPOUND_REFERENCE= NO

-# If the SHOW_HEADERFILE tag is set to YES then the documentation for a class
-# will show which file needs to be included to use the class.
-# The default value is: YES.
-
-SHOW_HEADERFILE        = YES
-
 # If the SHOW_INCLUDE_FILES tag is set to YES then doxygen will put a list of
 # the files that are included by a file in the documentation of that file.
 # The default value is: YES.
@ -765,8 +767,7 @@ FILE_VERSION_FILTER    =
 # output files in an output format independent way. To create the layout file
 # that represents doxygen's defaults, run doxygen with the -l option. You can
 # optionally specify a file name after the option, if omitted DoxygenLayout.xml
-# will be used as the name of the layout file. See also section "Changing the
-# layout of pages" for information.
+# will be used as the name of the layout file.
 #
 # Note that if you run doxygen from a directory containing a file called
 # DoxygenLayout.xml, doxygen will parse it automatically even if the LAYOUT_FILE
@ -812,26 +813,18 @@ WARNINGS               = YES
 WARN_IF_UNDOCUMENTED   = YES

 # If the WARN_IF_DOC_ERROR tag is set to YES, doxygen will generate warnings for
-# potential errors in the documentation, such as documenting some parameters in
-# a documented function twice, or documenting parameters that don't exist or
-# using markup commands wrongly.
+# potential errors in the documentation, such as not documenting some parameters
+# in a documented function, or documenting parameters that don't exist or using
+# markup commands wrongly.
 # The default value is: YES.

 WARN_IF_DOC_ERROR      = YES

-# If WARN_IF_INCOMPLETE_DOC is set to YES, doxygen will warn about incomplete
-# function parameter documentation. If set to NO, doxygen will accept that some
-# parameters have no documentation without warning.
-# The default value is: YES.
-
-WARN_IF_INCOMPLETE_DOC = YES
-
 # This WARN_NO_PARAMDOC option can be enabled to get warnings for functions that
 # are documented, but have no documentation for their parameters or return
-# value. If set to NO, doxygen will only warn about wrong parameter
-# documentation, but not about the absence of documentation. If EXTRACT_ALL is
-# set to YES then this flag will automatically be disabled. See also
-# WARN_IF_INCOMPLETE_DOC
+# value. If set to NO, doxygen will only warn about wrong or incomplete
+# parameter documentation, but not about the absence of documentation. If
+# EXTRACT_ALL is set to YES then this flag will automatically be disabled.
 # The default value is: NO.

 WARN_NO_PARAMDOC       = NO
@ -857,10 +850,7 @@ WARN_FORMAT            = "$file:$line: $text"

 # The WARN_LOGFILE tag can be used to specify a file to which warning and error
 # messages should be written. If left blank the output is written to standard
-# error (stderr). In case the file specified cannot be opened for writing the
-# warning and error messages are written to standard error. When as file - is
-# specified the warning and error messages are written to standard output
-# (stdout).
+# error (stderr).

 WARN_LOGFILE           =

@ -898,55 +888,16 @@ INPUT_ENCODING         = UTF-8
 #
 # If left blank the following patterns are tested:*.c, *.cc, *.cxx, *.cpp,
 # *.c++, *.java, *.ii, *.ixx, *.ipp, *.i++, *.inl, *.idl, *.ddl, *.odl, *.h,
-# *.hh, *.hxx, *.hpp, *.h++, *.l, *.cs, *.d, *.php, *.php4, *.php5, *.phtml,
-# *.inc, *.m, *.markdown, *.md, *.mm, *.dox (to be provided as doxygen C
-# comment), *.py, *.pyw, *.f90, *.f95, *.f03, *.f08, *.f18, *.f, *.for, *.vhd,
-# *.vhdl, *.ucf, *.qsf and *.ice.
+# *.hh, *.hxx, *.hpp, *.h++, *.cs, *.d, *.php, *.php4, *.php5, *.phtml, *.inc,
+# *.m, *.markdown, *.md, *.mm, *.dox (to be provided as doxygen C comment),
+# *.py, *.pyw, *.f90, *.f95, *.f03, *.f08, *.f18, *.f, *.for, *.vhd, *.vhdl,
+# *.ucf, *.qsf and *.ice.

 FILE_PATTERNS          = *.c \
-                         *.cc \
-                         *.cxx \
                         *.cpp \
-                         *.c++ \
-                         *.java \
-                         *.ii \
-                         *.ixx \
-                         *.ipp \
-                         *.i++ \
-                         *.inl \
-                         *.idl \
-                         *.ddl \
-                         *.odl \
                         *.h \
-                         *.hh \
-                         *.hxx \
-                         *.hpp \
-                         *.h++ \
-                         *.cs \
-                         *.d \
-                         *.php \
-                         *.php4 \
-                         *.php5 \
-                         *.phtml \
-                         *.inc \
-                         *.m \
-                         *.markdown \
                         *.md \
-                         *.mm \
-                         *.dox \
-                         *.py \
-                         *.pyw \
-                         *.f90 \
-                         *.f95 \
-                         *.f03 \
-                         *.f08 \
-                         *.f \
-                         *.for \
-                         *.tcl \
-                         *.vhd \
-                         *.vhdl \
-                         *.ucf \
-                         *.qsf
+                         *.py=scripts/py_filter

 # The RECURSIVE tag can be used to specify whether or not subdirectories should
 # be searched for input files as well.
@ -983,7 +934,7 @@ EXCLUDE_PATTERNS       =
 # (namespaces, classes, functions, etc.) that should be excluded from the
 # output. The symbol name can be a fully qualified name, a word, or if the
 # wildcard * is used, a substring. Examples: ANamespace, AClass,
-# ANamespace::AClass, ANamespace::*Test
+# AClass::ANamespace, ANamespace::*Test
 #
 # Note that the wildcards are matched against the file with absolute path, so to
 # exclude all test directories use the pattern */test/*
@ -1158,6 +1109,44 @@ USE_HTAGS              = NO

 VERBATIM_HEADERS       = YES

+# If the CLANG_ASSISTED_PARSING tag is set to YES then doxygen will use the
+# clang parser (see:
+# http://clang.llvm.org/) for more accurate parsing at the cost of reduced
+# performance. This can be particularly helpful with template rich C++ code for
+# which doxygen's built-in parser lacks the necessary type information.
+# Note: The availability of this option depends on whether or not doxygen was
+# generated with the -Duse_libclang=ON option for CMake.
+# The default value is: NO.
+
+CLANG_ASSISTED_PARSING = NO
+
+# If clang assisted parsing is enabled and the CLANG_ADD_INC_PATHS tag is set to
+# YES then doxygen will add the directory of each input to the include path.
+# The default value is: YES.
+
+CLANG_ADD_INC_PATHS    = YES
+
+# If clang assisted parsing is enabled you can provide the compiler with command
+# line options that you would normally use when invoking the compiler. Note that
+# the include paths will already be set by doxygen for the files and directories
+# specified with INPUT and INCLUDE_PATH.
+# This tag requires that the tag CLANG_ASSISTED_PARSING is set to YES.
+
+CLANG_OPTIONS          =
+
+# If clang assisted parsing is enabled you can provide the clang parser with the
+# path to the directory containing a file called compile_commands.json. This
+# file is the compilation database (see:
+# http://clang.llvm.org/docs/HowToSetupToolingForLLVM.html) containing the
+# options used when the source files were built. This is equivalent to
+# specifying the -p option to a clang tool, such as clang-check. These options
+# will then be passed to the parser. Any options specified with CLANG_OPTIONS
+# will be added as well.
+# Note: The availability of this option depends on whether or not doxygen was
+# generated with the -Duse_libclang=ON option for CMake.
+
+CLANG_DATABASE_PATH    =
+
 #---------------------------------------------------------------------------
 # Configuration options related to the alphabetical class index
 #---------------------------------------------------------------------------
@ -1268,7 +1257,7 @@ HTML_EXTRA_FILES       =

 # The HTML_COLORSTYLE_HUE tag controls the color of the HTML output. Doxygen
 # will adjust the colors in the style sheet and background images according to
-# this color. Hue is specified as an angle on a color-wheel, see
+# this color. Hue is specified as an angle on a colorwheel, see
 # https://en.wikipedia.org/wiki/Hue for more information. For instance the value
 # 0 represents red, 60 is yellow, 120 is green, 180 is cyan, 240 is blue, 300
 # purple, and 360 is red again.
@ -1278,7 +1267,7 @@ HTML_EXTRA_FILES       =
 HTML_COLORSTYLE_HUE    = 220

 # The HTML_COLORSTYLE_SAT tag controls the purity (or saturation) of the colors
-# in the HTML output. For a value of 0 the output will use gray-scales only. A
+# in the HTML output. For a value of 0 the output will use grayscales only. A
 # value of 255 will produce the most vivid colors.
 # Minimum value: 0, maximum value: 255, default value: 100.
 # This tag requires that the tag GENERATE_HTML is set to YES.
@ -1360,13 +1349,6 @@ GENERATE_DOCSET        = NO

 DOCSET_FEEDNAME        = "Doxygen generated docs"

-# This tag determines the URL of the docset feed. A documentation feed provides
-# an umbrella under which multiple documentation sets from a single provider
-# (such as a company or product suite) can be grouped.
-# This tag requires that the tag GENERATE_DOCSET is set to YES.
-
-DOCSET_FEEDURL         =
-
 # This tag specifies a string that should uniquely identify the documentation
 # set bundle. This should be a reverse domain-name style string, e.g.
 # com.mycompany.MyDocSet. Doxygen will append .docset to the name.
@ -1392,12 +1374,8 @@ DOCSET_PUBLISHER_NAME  = Publisher
 # If the GENERATE_HTMLHELP tag is set to YES then doxygen generates three
 # additional HTML index files: index.hhp, index.hhc, and index.hhk. The
 # index.hhp is a project file that can be read by Microsoft's HTML Help Workshop
-# on Windows. In the beginning of 2021 Microsoft took the original page, with
-# a.o. the download links, offline the HTML help workshop was already many years
-# in maintenance mode). You can download the HTML help workshop from the web
-# archives at Installation executable (see:
-# http://web.archive.org/web/20160201063255/http://download.microsoft.com/downlo
-# ad/0/A/9/0A939EF6-E31C-430F-A3DF-DFAE7960D564/htmlhelp.exe).
+# (see:
+# https://www.microsoft.com/en-us/download/details.aspx?id=21138) on Windows.
 #
 # The HTML Help Workshop contains a compiler that can convert all HTML output
 # generated by doxygen into a single compiled HTML file (.chm). Compiled HTML
@ -1556,28 +1534,16 @@ DISABLE_INDEX          = NO
 # to work a browser that supports JavaScript, DHTML, CSS and frames is required
 # (i.e. any modern browser). Windows users are probably better off using the
 # HTML help feature. Via custom style sheets (see HTML_EXTRA_STYLESHEET) one can
-# further fine tune the look of the index (see "Fine-tuning the output"). As an
-# example, the default style sheet generated by doxygen has an example that
-# shows how to put an image at the root of the tree instead of the PROJECT_NAME.
-# Since the tree basically has the same information as the tab index, you could
-# consider setting DISABLE_INDEX to YES when enabling this option.
+# further fine-tune the look of the index. As an example, the default style
+# sheet generated by doxygen has an example that shows how to put an image at
+# the root of the tree instead of the PROJECT_NAME. Since the tree basically has
+# the same information as the tab index, you could consider setting
+# DISABLE_INDEX to YES when enabling this option.
 # The default value is: NO.
 # This tag requires that the tag GENERATE_HTML is set to YES.

 GENERATE_TREEVIEW      = YES

-# When both GENERATE_TREEVIEW and DISABLE_INDEX are set to YES, then the
-# FULL_SIDEBAR option determines if the side bar is limited to only the treeview
-# area (value NO) or if it should extend to the full height of the window (value
-# YES). Setting this to YES gives a layout similar to
-# https://docs.readthedocs.io with more room for contents, but less room for the
-# project logo, title, and description. If either GENERATE_TREEVIEW or
-# DISABLE_INDEX is set to NO, this option has no effect.
-# The default value is: NO.
-# This tag requires that the tag GENERATE_HTML is set to YES.
-
-FULL_SIDEBAR           = NO
-
 # The ENUM_VALUES_PER_LINE tag can be used to set the number of enum values that
 # doxygen will group on one line in the generated HTML documentation.
 #
@ -1602,13 +1568,6 @@ TREEVIEW_WIDTH         = 250

 EXT_LINKS_IN_WINDOW    = NO

-# If the OBFUSCATE_EMAILS tag is set to YES, doxygen will obfuscate email
-# addresses.
-# The default value is: YES.
-# This tag requires that the tag GENERATE_HTML is set to YES.
-
-OBFUSCATE_EMAILS       = YES
-
 # If the HTML_FORMULA_FORMAT option is set to svg, doxygen will use the pdf2svg
 # tool (see https://github.com/dawbarton/pdf2svg) or inkscape (see
 # https://inkscape.org) to generate formulas as SVG images instead of PNGs for
@ -1657,29 +1616,11 @@ FORMULA_MACROFILE      =

 USE_MATHJAX            = NO

-# With MATHJAX_VERSION it is possible to specify the MathJax version to be used.
-# Note that the different versions of MathJax have different requirements with
-# regards to the different settings, so it is possible that also other MathJax
-# settings have to be changed when switching between the different MathJax
-# versions.
-# Possible values are: MathJax_2 and MathJax_3.
-# The default value is: MathJax_2.
-# This tag requires that the tag USE_MATHJAX is set to YES.
-
-MATHJAX_VERSION        = MathJax_2
-
 # When MathJax is enabled you can set the default output format to be used for
-# the MathJax output. For more details about the output format see MathJax
-# version 2 (see:
-# http://docs.mathjax.org/en/v2.7-latest/output.html) and MathJax version 3
-# (see:
-# http://docs.mathjax.org/en/latest/web/components/output.html).
+# the MathJax output. See the MathJax site (see:
+# http://docs.mathjax.org/en/v2.7-latest/output.html) for more details.
 # Possible values are: HTML-CSS (which is slower, but has the best
-# compatibility. This is the name for Mathjax version 2, for MathJax version 3
-# this will be translated into chtml), NativeMML (i.e. MathML. Only supported
-# for NathJax 2. For MathJax version 3 chtml will be used instead.), chtml (This
-# is the name for Mathjax version 3, for MathJax version 2 this will be
-# translated into HTML-CSS) and SVG.
+# compatibility), NativeMML (i.e. MathML) and SVG.
 # The default value is: HTML-CSS.
 # This tag requires that the tag USE_MATHJAX is set to YES.

@ -1692,21 +1633,15 @@ MATHJAX_FORMAT         = HTML-CSS
 # MATHJAX_RELPATH should be ../mathjax. The default value points to the MathJax
 # Content Delivery Network so you can quickly see the result without installing
 # MathJax. However, it is strongly recommended to install a local copy of
-# MathJax from https://www.mathjax.org before deployment. The default value is:
-# - in case of MathJax version 2: https://cdn.jsdelivr.net/npm/mathjax@2
-# - in case of MathJax version 3: https://cdn.jsdelivr.net/npm/mathjax@3
+# MathJax from https://www.mathjax.org before deployment.
+# The default value is: https://cdn.jsdelivr.net/npm/mathjax@2.
 # This tag requires that the tag USE_MATHJAX is set to YES.

 MATHJAX_RELPATH        = https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.2/

 # The MATHJAX_EXTENSIONS tag can be used to specify one or more MathJax
 # extension names that should be enabled during MathJax rendering. For example
-# for MathJax version 2 (see
-# https://docs.mathjax.org/en/v2.7-latest/tex.html#tex-and-latex-extensions):
 # MATHJAX_EXTENSIONS = TeX/AMSmath TeX/AMSsymbols
-# For example for MathJax version 3 (see
-# http://docs.mathjax.org/en/latest/input/tex/extensions/index.html):
-# MATHJAX_EXTENSIONS = ams
 # This tag requires that the tag USE_MATHJAX is set to YES.

 MATHJAX_EXTENSIONS     =
@ -1886,31 +1821,29 @@ PAPER_TYPE             = a4

 EXTRA_PACKAGES         =

-# The LATEX_HEADER tag can be used to specify a user-defined LaTeX header for
-# the generated LaTeX document. The header should contain everything until the
-# first chapter. If it is left blank doxygen will generate a standard header. It
-# is highly recommended to start with a default header using
-# doxygen -w latex new_header.tex new_footer.tex new_stylesheet.sty
-# and then modify the file new_header.tex. See also section "Doxygen usage" for
-# information on how to generate the default header that doxygen normally uses.
+# The LATEX_HEADER tag can be used to specify a personal LaTeX header for the
+# generated LaTeX document. The header should contain everything until the first
+# chapter. If it is left blank doxygen will generate a standard header. See
+# section "Doxygen usage" for information on how to let doxygen write the
+# default header to a separate file.
 #
-# Note: Only use a user-defined header if you know what you are doing!
-# Note: The header is subject to change so you typically have to regenerate the
-# default header when upgrading to a newer version of doxygen. The following
-# commands have a special meaning inside the header (and footer): For a
-# description of the possible markers and block names see the documentation.
+# Note: Only use a user-defined header if you know what you are doing! The
+# following commands have a special meaning inside the header: $title,
+# $datetime, $date, $doxygenversion, $projectname, $projectnumber,
+# $projectbrief, $projectlogo. Doxygen will replace $title with the empty
+# string, for the replacement values of the other commands the user is referred
+# to HTML_HEADER.
 # This tag requires that the tag GENERATE_LATEX is set to YES.

 LATEX_HEADER           =

-# The LATEX_FOOTER tag can be used to specify a user-defined LaTeX footer for
-# the generated LaTeX document. The footer should contain everything after the
-# last chapter. If it is left blank doxygen will generate a standard footer. See
+# The LATEX_FOOTER tag can be used to specify a personal LaTeX footer for the
+# generated LaTeX document. The footer should contain everything after the last
+# chapter. If it is left blank doxygen will generate a standard footer. See
 # LATEX_HEADER for more information on how to generate a default footer and what
-# special commands can be used inside the footer. See also section "Doxygen
-# usage" for information on how to generate the default footer that doxygen
-# normally uses. Note: Only use a user-defined footer if you know what you are
-# doing!
+# special commands can be used inside the footer.
+#
+# Note: Only use a user-defined footer if you know what you are doing!
 # This tag requires that the tag GENERATE_LATEX is set to YES.

 LATEX_FOOTER           =
@ -1955,7 +1888,8 @@ USE_PDFLATEX           = YES

 # If the LATEX_BATCHMODE tag is set to YES, doxygen will add the \batchmode
 # command to the generated LaTeX files. This will instruct LaTeX to keep running
-# if errors occur, instead of asking the user for help.
+# if errors occur, instead of asking the user for help. This option is also used
+# when generating formulas in HTML.
 # The default value is: NO.
 # This tag requires that the tag GENERATE_LATEX is set to YES.

@ -1968,6 +1902,16 @@ LATEX_BATCHMODE        = NO

 LATEX_HIDE_INDICES     = NO

+# If the LATEX_SOURCE_CODE tag is set to YES then doxygen will include source
+# code with syntax highlighting in the LaTeX output.
+#
+# Note that which sources are shown also depends on other settings such as
+# SOURCE_BROWSER.
+# The default value is: NO.
+# This tag requires that the tag GENERATE_LATEX is set to YES.
+
+LATEX_SOURCE_CODE      = NO
+
 # The LATEX_BIB_STYLE tag can be used to specify the style to use for the
 # bibliography, e.g. plainnat, or ieeetr. See
 # https://en.wikipedia.org/wiki/BibTeX and \cite for more info.
@ -2048,6 +1992,16 @@ RTF_STYLESHEET_FILE    =

 RTF_EXTENSIONS_FILE    =

+# If the RTF_SOURCE_CODE tag is set to YES then doxygen will include source code
+# with syntax highlighting in the RTF output.
+#
+# Note that which sources are shown also depends on other settings such as
+# SOURCE_BROWSER.
+# The default value is: NO.
+# This tag requires that the tag GENERATE_RTF is set to YES.
+
+RTF_SOURCE_CODE        = NO
+
 #---------------------------------------------------------------------------
 # Configuration options related to the man page output
 #---------------------------------------------------------------------------
@ -2144,6 +2098,15 @@ GENERATE_DOCBOOK       = NO

 DOCBOOK_OUTPUT         = docbook

+# If the DOCBOOK_PROGRAMLISTING tag is set to YES, doxygen will include the
+# program listings (including syntax highlighting and cross-referencing
+# information) to the DOCBOOK output. Note that enabling this will significantly
+# increase the size of the DOCBOOK output.
+# The default value is: NO.
+# This tag requires that the tag GENERATE_DOCBOOK is set to YES.
+
+DOCBOOK_PROGRAMLISTING = NO
+
 #---------------------------------------------------------------------------
 # Configuration options for the AutoGen Definitions output
 #---------------------------------------------------------------------------
@ -2156,6 +2119,10 @@ DOCBOOK_OUTPUT         = docbook

 GENERATE_AUTOGEN_DEF   = NO

+#---------------------------------------------------------------------------
+# Configuration options related to Sqlite3 output
+#---------------------------------------------------------------------------
+
 #---------------------------------------------------------------------------
 # Configuration options related to the Perl module output
 #---------------------------------------------------------------------------
@ -2322,6 +2289,15 @@ EXTERNAL_PAGES         = YES
 # Configuration options related to the dot tool
 #---------------------------------------------------------------------------

+# If the CLASS_DIAGRAMS tag is set to YES, doxygen will generate a class diagram
+# (in HTML and LaTeX) for classes with base or super classes. Setting the tag to
+# NO turns the diagrams off. Note that this option also works with HAVE_DOT
+# disabled, but it is recommended to install and use dot, since it yields more
+# powerful graphs.
+# The default value is: YES.
+
+CLASS_DIAGRAMS         = YES
+
 # You can include diagrams made with dia in doxygen documentation. Doxygen will
 # then run dia to produce the diagram and insert it in the documentation. The
 # DIA_PATH tag allows you to specify the directory where the dia binary resides.
@ -2340,7 +2316,7 @@ HIDE_UNDOC_RELATIONS   = YES
 # http://www.graphviz.org/), a graph visualization toolkit from AT&T and Lucent
 # Bell Labs. The other options in this section have no effect if this option is
 # set to NO
-# The default value is: NO.
+# The default value is: YES.

 HAVE_DOT               = YES

@ -2378,14 +2354,11 @@ DOT_FONTSIZE           = 10

 DOT_FONTPATH           =

-# If the CLASS_GRAPH tag is set to YES (or GRAPH) then doxygen will generate a
-# graph for each documented class showing the direct and indirect inheritance
-# relations. In case HAVE_DOT is set as well dot will be used to draw the graph,
-# otherwise the built-in generator will be used. If the CLASS_GRAPH tag is set
-# to TEXT the direct and indirect inheritance relations will be shown as texts /
-# links.
-# Possible values are: NO, YES, TEXT and GRAPH.
+# If the CLASS_GRAPH tag is set to YES then doxygen will generate a graph for
+# each documented class showing the direct and indirect inheritance relations.
+# Setting this tag to YES will force the CLASS_DIAGRAMS tag to NO.
 # The default value is: YES.
+# This tag requires that the tag HAVE_DOT is set to YES.

 CLASS_GRAPH            = YES

@ -2514,13 +2487,6 @@ GRAPHICAL_HIERARCHY    = YES

 DIRECTORY_GRAPH        = YES

-# The DIR_GRAPH_MAX_DEPTH tag can be used to limit the maximum number of levels
-# of child directories generated in directory dependency graphs by dot.
-# Minimum value: 1, maximum value: 25, default value: 1.
-# This tag requires that the tag DIRECTORY_GRAPH is set to YES.
-
-DIR_GRAPH_MAX_DEPTH    = 1
-
 # The DOT_IMAGE_FORMAT tag can be used to set the image format of the images
 # generated by dot. For an explanation of the image formats see the section
 # output formats in the documentation of the dot tool (Graphviz (see:
@ -2528,7 +2494,9 @@ DIR_GRAPH_MAX_DEPTH    = 1
 # Note: If you choose svg you need to set HTML_FILE_EXTENSION to xhtml in order
 # to make the SVG files visible in IE 9+ (other browsers do not have this
 # requirement).
-# Possible values are: png, jpg, gif, svg, png:gd, png:gd:gd, png:cairo,
+# Possible values are: png, png:cairo, png:cairo:cairo, png:cairo:gd, png:gd,
+# png:gd:gd, jpg, jpg:cairo, jpg:cairo:gd, jpg:gd, jpg:gd:gd, gif, gif:cairo,
+# gif:cairo:gd, gif:gd, gif:gd:gd, svg, png:gd, png:gd:gd, png:cairo,
 # png:cairo:gd, png:cairo:cairo, png:cairo:gdiplus, png:gdiplus and
 # png:gdiplus:gdiplus.
 # The default value is: png.
@ -2574,10 +2542,10 @@ MSCFILE_DIRS           =
 DIAFILE_DIRS           =

 # When using plantuml, the PLANTUML_JAR_PATH tag should be used to specify the
-# path where java can find the plantuml.jar file or to the filename of jar file
-# to be used. If left blank, it is assumed PlantUML is not used or called during
-# a preprocessing step. Doxygen will generate a warning when it encounters a
-# \startuml command in this case and will not generate output for the diagram.
+# path where java can find the plantuml.jar file. If left blank, it is assumed
+# PlantUML is not used or called during a preprocessing step. Doxygen will
+# generate a warning when it encounters a \startuml command in this case and
+# will not generate output for the diagram.

 PLANTUML_JAR_PATH      =

@ -2639,8 +2607,6 @@ DOT_MULTI_TARGETS      = NO
 # If the GENERATE_LEGEND tag is set to YES doxygen will generate a legend page
 # explaining the meaning of the various boxes and arrows in the dot generated
 # graphs.
-# Note: This tag requires that UML_LOOK isn't set, i.e. the doxygen internal
-# graphical representation for inheritance and collaboration diagrams is used.
 # The default value is: YES.
 # This tag requires that the tag HAVE_DOT is set to YES.

@ -2649,8 +2615,8 @@ GENERATE_LEGEND        = YES
 # If the DOT_CLEANUP tag is set to YES, doxygen will remove the intermediate
 # files that are used to generate the various graphs.
 #
-# Note: This setting is not only used for dot files but also for msc temporary
-# files.
+# Note: This setting is not only used for dot files but also for msc and
+# plantuml temporary files.
 # The default value is: YES.

 DOT_CLEANUP            = YES
--- a/README.md
+++ b/README.md
@ -1,108 +1,112 @@
 # Library for Acoustic Signal Processing

-Welcome to LASP: Library for Acoustic Signal Processing. LASP is a C++ library
-with a Python interface which is supposed to process (multi-) microphone
-acoustic data in real time on a PC and output results.
+- Master branch: [![Build Status](https://drone.ascee.nl/api/badges/ASCEE/lasp/status.svg?ref=refs/heads/master)](https://drone.ascee.nl/ASCEE/lasp)
+- Develop branch: [![Build Status](https://drone.ascee.nl/api/badges/ASCEE/lasp/status.svg?ref=refs/heads/develop)](https://drone.ascee.nl/ASCEE/lasp)

-At the point in time of this writing, we are yet unsure whether the Raspberry
-PI will have enough computational power to this end, but may be by the time it
-is finished, we have a new faster generation :).
+
+Welcome to LASP: Library for Acoustic Signal Processing. LASP is a C++ library
+with a Python interface which is supposed to acquire and process (multi) sensor data in real time on a PC and output results.

 Current features that are implemented:
- Compile-time determination of the floating-point accuracy (32/64 bit)
- Fast convolution FIR filter implementation
- Sample rate decimation by an integer factor of 4.
- Octave filterbank FIR filters designed to comply with IEC 61260
-  (1995).
+
+- Communication with data acquisition (DAQ) devices, of which:
+    - Internal sound cards via the [RtAudio](http://www.music.mcgill.ca/~gary/rtaudio) backend. Many thanks to Gary P. Scavone et al.
+    - [Measurement Computing](https://www.mccdaq.com) [DT9838A](https://www.mccdaq.com/Products/Sound-Vibration-DAQ/DT9837) signal analyzer.
+- Configuration of DAQ devices: AC coupling, IEPE, sensitivity physical
+  quantities.
+- Recording of signals from these DAQ devices, and storing in a HDF5 file.
+- Filter designers to create A/C sound pressure weighting
+- Biquad filter designers for low pass, high pass, peaking and notch filters
+- A Peak Programme Meter (PPM) to monitor signal levels from DAQ and to watch
+  for signal clipping.
+- A signal generator to create sine waves, sweeps and noise (white / pink).
+- Equalizers to equalize the output prior to sending.
 - Averaged power spectra and power spectral density determination
  using Welch' method. Taper functions of Hann, Hamming, Bartlett and
  Blackman are provided.
- A thread-safe job queue including routines to create worker threads.
- Several linear algebra routines (wrappers around BLAS and LAPACK).
- A nice debug tracer implementation
- Third octave filter bank FIR filters designed to comply with IEC 61260
+- (One third) octave filter bank filters designed to comply with IEC 61260
  (1995).
 - Slow and fast time updates of (A/C/Z) weighted sound pressure levels
+- Full Sound Level Meter implementation
+- Real time Sound Level meter, Power / Transfer function estimator
+- Spectra data smoothing algorithms
+- Sensor calibration for microphones

 Future features (wish-list)
- Conventional and delay-and-sum beam-forming algorithms

-For now, the source code is well-documented but it requires some
-additional documentation (the math behind it). This will be published
-in a sister repository (https://code.ascee.nl/ascee/lasp-doc).
+- Conventional and delay-and-sum beam-forming algorithms
+- Impedance tube measurement processing
+
+For now, the source code is well-documented on [lasp.ascee.nl](https://lasp.ascee.nl) but it requires some
+additional documentation (the math behind it). This is maintained
+in a sister repository [lasp-doc](https://code.ascee.nl/ascee/lasp-doc). The
+most recent

 If you have any question(s), please feel free to contact us: info@ascee.nl.

+# Installation

-# Building from source
+## Dependencies

-Two commands that install all requirements (for Ubuntu / Linux Mint)
-
- `pip install scipy numpy build scikit-build appdirs`
- `sudo apt install libusb-dev libpulse-dev libboost-dev`
-
-## Runtime dependencies (Linux)
-
- FFTW (For really fast FFT's). If compiled with Ffftpack, this library is not
-  required.
- libUlDAQ, for the Measurement Computing DT9837A USB DAQ box
-    - GNU Autotools, for compiling libUlDAQ
- RtAudio, for Audio DAQ backends
- libusb
- BLAS (OpenBLAS, other).
-
-## Editable install
-
-In the root directory of the repository, run:
-
- `pip3 isntall --user -e .`
- `cmake .`
- `make -j`
+- `$ sudo apt install python3-pybind11 libopenblas-dev python3-pip python3-scipy libusb-1.0-0-dev libpulse-dev cmake-curses-gui python3-h5py`
+- `$ pip3 install --user -r requirements.txt`


-
-## Build dependencies
-
-Optional dependencies, which can be turned ON/OFF using CMake:
-
- Build tools: compiler [http://cmake.org](CMake), the Python packages:
-    - Scipy
-    - Numpy
-    - appdirs
-    These can all be installed using:
-
- The following Python packages need also be available:
-  - `Scipy` (which includes Numpy). Install with `sudo apt install
-    python3-scipy`, or `pacman -S scipy`.
-  - `appdirs`, which can be grabbed from [https://pypi.org](Pypi)
-
-
-
-## Compilation of LASP
-
-### Archlinux
-
-Compiling the code on Archlinux requires the following packages to be available:
-
- openblas-lapack (AUR)
- Python>=3.7
- Numpy (Python-numpy)
- Cython
-
-### Ubuntu / Linux Mint
-
-*Only tested with Linux Mint 18.04*, we require the following packages for
-compilation:
-
- build-essential
- cython
- python3-numpy
- libopenblas
-
-If building RtAudio with the ALSA backend:
+If building RtAudio with the ALSA backend, you will also require the following packages:

 - libclalsadrv-dev
- libopenblas-base
- libopenblas-dev
- libusb-1.0-dev

+If building RtAudio with the Jack Audio Connection Kit (JACK) backend, you will also require the following packages:
+
+- libjack-jackd2-dev
+
+## Download & build
+
+- `$ git clone --recursive https://code.ascee.nl/ASCEE/lasp.git`
+- `$ cd lasp`
+
+For a release build:
+
+- `$ cmake .`
+
+or optionally for a custom build:
+
+- `$ ccmake .`
+
+Configure and run:
+
+- `$ make -j`
+
+### Build documentation
+
+In directory:
+
+`$ sudo apt install doxygen graphviz`
+`$ pip install doxypypy`
+
+While still in lasp dir:
+
+`$ doxygen`
+
+This will build the documentation. It can be read by:
+
+`$ <YOUR-BROWSER> doc/html/index.html`
+
+Or via docker:
+
+`$ docker build -t lasp_ascee_nl:latest .`
+
+## Install
+
+For an editable install (while developing):
+
+- `$ pip3 install --prefix=$HOME/.local -e .`
+
+To install locally, for a fixed version:
+
+- `$ pip3 install --prefix=$HOME/.local`
+
+## Usage
+
+- See examples directories for IPython notebooks.
+- Please refer to the [documentation](https://lasp.ascee.nl/) for features.
--- a/examples/example_biquadbank.py
+++ b/examples/example_biquadbank.py
@ -2,15 +2,10 @@
 import numpy as np
 from lasp import SeriesBiquad, AvPowerSpectra
 from lasp.filter import SPLFilterDesigner
-
 import matplotlib.pyplot as plt
 from scipy.signal import sosfreqz
-# plt.close('all')
+plt.close('all')

-# def test_cppslm2():
-#     """
-#     Generate a sine wave, now A-weighted
-#     """
 fs = 48000
 omg = 2*np.pi*1000

--- a/pyproject.toml
+++ b/pyproject.toml
@ -1,17 +0,0 @@
-[project] # Project metadata
-name = "lasp"
-readme = "README.md"
-requires-python = ">=3.8"
-license = { "file" = "LICENSE" }
-authors = [{ "name" = "J.A. de Jong et al.", "email" = "info@ascee.nl" }]
-
-classifiers = [
-    "Topic :: Scientific/Engineering",
-    "Programming Language :: Python :: 3.8",
-    "Operating System :: POSIX :: Linux",
-    "Operating System :: Microsoft :: Windows",
-]
-
-# urls = { "Documentation" = "https://" }
-dynamic = ["version", "description"]
-
--- a/requirements.txt
+++ b/requirements.txt
@ -0,0 +1,3 @@
+appdirs
+dataclasses_json
+matplotlib
--- a/scripts/py_filter
+++ b/scripts/py_filter
@ -0,0 +1,4 @@
+#!/bin/bash
+# Script used to filter Python files such that it can be used together with
+# Doxygen
+doxypypy -a -c $1
--- a/setup.py
+++ b/setup.py
@ -1,16 +1,22 @@
-import glob
+import glob, os
 import platform

 from setuptools import setup

 if 'Linux' in platform.platform():
-    extension = list(glob.glob('src/lasp/lasp_cpp.cpython*'))
-    if len(extension) == 0:
+    ext_name_glob = 'lasp_cpp.cpython*'
+    extensions = list(glob.glob('src/lasp/' + ext_name_glob))
+
+    # Split of path from file.
+    ext_names = [os.path.split(a)[1] for a in extensions]
+
+    print(extensions)
+    if len(extensions) == 0:
        raise RuntimeError('Please first run CMake to build extension')
-    elif len(extension) > 1:
+    elif len(extensions) > 1:
        raise RuntimeError('Too many extension files found')

-    pkgdata = extension
+    pkgdata = ext_names

 else:
    raise RuntimeError('Not yet Windows-proof')
@ -24,9 +30,6 @@ classifiers = [

 keywords = ["DSP", "DAQ", "Signal processing"]

-with open('README.md', 'r') as f:
-    readme = f.read()
-

 setup(
    name="lasp",
@ -40,12 +43,11 @@ setup(
    classifiers=classifiers,
    keywords=keywords,
    license="MIT",
-    readme=readme,
    dependencies=["numpy", "scipy", "appdirs", "h5py", "appdirs",
-                "dataclasses_json"],
+                  "dataclasses_json"],
+    package_dir={"": "src"},
    packages=['lasp', 'lasp.filter', 'lasp.tools'],
-    data_files = pkgdata,
    include_package_data=True,
-    package_dir={'': 'src'},
+    package_data={'lasp': pkgdata},
    python_requires='>=3.8',
 )
--- a/src/lasp/init.py
+++ b/src/lasp/init.py
@ -1,4 +1,3 @@
-# Comments are what is imported, state of 6-8-2021
 """
 LASP: Library for Acoustic Signal Processing

@ -14,6 +13,7 @@ from .lasp_octavefilter import *
 from .lasp_slm import *  # SLM, Dummy
 from .lasp_record import *  # RecordStatus, Recording
 from .lasp_daqconfigs import *
+from .lasp_measurementset import *
 # from .lasp_siggen import *  # SignalType, NoiseType, SiggenMessage, SiggenData, Siggen
 # from .lasp_weighcal import *  # WeighCal
 # from .tools import *  # SmoothingType, smoothSpectralData, SmoothingWidth
--- a/src/lasp/device/lasp_daqdata.h
+++ b/src/lasp/device/lasp_daqdata.h
@ -109,7 +109,7 @@ public:
   * Overwrites any existing available data.
   *
   * @param channel The channel to copy to
-   * @param ptrs Pointers to data from channels
+   * @param ptr Pointers to data from channels
   */
  void copyInFromRaw(const us channel, const byte_t *ptr);

@ -135,7 +135,7 @@ public:
   * column vector of floats. For data that is not already floating-point,
   * the data is scaled back from MAX_INT to +1.0.
   *
-   * @param channel The channel to convert
+   * @param channel_no The channel number to convert
   *
   * @return Array of floats
   */
@ -146,8 +146,8 @@ public:
   * column vector of floats. For data that is not already floating-point,
   * the data is scaled back from MAX_INT to +1.0.
   *
-   * @param channel The channel to convert
   * @param frame_no The frame number to convert
+   * @param channel_no The channel number to convert
   *
   * @return Float value
   */
@ -157,9 +157,9 @@ public:
   * @brief Convert to channel data of native type from floating point values.
   * Useful for 'changing' raw data in any way.
   *
-   * @param channel_no
-   * @param channel_no
-   * @param data
+   * @param frame_no The frame
+   * @param channel_no The channel
+   * @param data The value
   */
  void fromFloat(const us frame_no, const us channel_no,
                 const d data);
@ -169,7 +169,7 @@ public:
   * Useful for 'changing' raw data in any way.
   *
   * @param channel The channel to convert
-   * @param data
+   * @param data Data to convert from float values
   */
  void fromFloat(const us channel, const arma::Col<d> &data);

--- a/src/lasp/device/lasp_deviceinfo.cpp
+++ b/src/lasp/device/lasp_deviceinfo.cpp
@ -12,8 +12,8 @@
 #endif


-std::vector<DeviceInfo> DeviceInfo::getDeviceInfo() {
-  std::vector<DeviceInfo> devs;
+DeviceInfoList DeviceInfo::getDeviceInfo() {
+  DeviceInfoList devs;
 #if LASP_HAS_ULDAQ ==1
  fillUlDaqDeviceInfo(devs);
 #endif
--- a/src/lasp/device/lasp_deviceinfo.h
+++ b/src/lasp/device/lasp_deviceinfo.h
@ -1,17 +1,34 @@
 #pragma once
 #include "lasp_config.h"
-#include "lasp_types.h"
 #include "lasp_daqconfig.h"
+#include "lasp_types.h"
+#include <memory>

 /** \addtogroup device
 * @{
 */

+using DeviceInfoList = std::vector<std::unique_ptr<DeviceInfo>>;
+
 /**
 * @brief Structure containing device info parameters
 */
 class DeviceInfo {
 public:
+  /**
+   * @brief Virtual desctructor. Can be derived class.
+   */
+  virtual ~DeviceInfo() {}
+
+  /**
+   * @brief Clone a device info.
+   *
+   * @return Cloned device info
+   */
+  virtual std::unique_ptr<DeviceInfo> clone() const {
+    return std::make_unique<DeviceInfo>(*this);
+  }
+
  /**
   * @brief Backend API corresponding to device
   */
@ -21,12 +38,6 @@ public:
   */
  string device_name = "";

-  /**
-   * @brief Specific for the device (Sub-API). Important for the RtAudio
-   * backend, as RtAudio is able to handle different API's.
-   */
-  int api_specific_devindex = -1;
-
  /**
   * @brief The available data types the device can output
   */
@ -104,6 +115,14 @@ public:
   */
  bool hasInternalOutputMonitor = false;

+  /**
+   * @brief This flag is used to be able to indicate that the device cannot run
+   * input and output streams independently, without opening the device in
+   * duplex mode. This is for example true for the UlDaq: only one handle to
+   * the device can be given at the same time.
+   */
+  bool duplexModeForced = false;
+
  /**
   * @brief The physical quantity of the output signal. For 'normal' audio
   * devices, this is typically a 'number' between +/- full scale. For some
@ -112,7 +131,6 @@ public:
   */
  DaqChannel::Qty physicalOutputQty = DaqChannel::Qty::Number;

-
  /**
   * @brief String representation of DeviceInfo
   *
@ -121,11 +139,9 @@ public:
  operator string() const {
    using std::endl;
    std::stringstream str;
-    str << api.apiname + " " << api_specific_devindex << endl
-        << " number of input channels: " << ninchannels << endl
-        /**
-         * @brief 
-         */
+    str << api.apiname + " " << endl
+        << " number of input channels: " << ninchannels
+        << endl
        << " number of output channels: " << noutchannels << endl;
    return str.str();
  }
@ -135,7 +151,7 @@ public:
   *
   * @return The device info's for each found device.
   */
-  static std::vector<DeviceInfo> getDeviceInfo();
+  static DeviceInfoList getDeviceInfo();
 };

 /** @} */
--- a/src/lasp/device/lasp_rtaudiodaq.cpp
+++ b/src/lasp/device/lasp_rtaudiodaq.cpp
@ -17,7 +17,19 @@ using rte = std::runtime_error;
 using std::vector;
 using lck = std::scoped_lock<std::mutex>;

-void fillRtAudioDeviceInfo(vector<DeviceInfo> &devinfolist) {
+class RtAudioDeviceInfo : public DeviceInfo {
+public:
+  /**
+   * @brief Specific for the device (Sub-API). Important for the RtAudio
+   * backend, as RtAudio is able to handle different API's.
+   */
+  int _api_devindex;
+  virtual std::unique_ptr<DeviceInfo> clone() const override {
+    return std::make_unique<DeviceInfo>(*this);
+  }
+};
+
+void fillRtAudioDeviceInfo(DeviceInfoList &devinfolist) {
  DEBUGTRACE_ENTER;

  vector<RtAudio::Api> apis;
@ -34,7 +46,7 @@ void fillRtAudioDeviceInfo(vector<DeviceInfo> &devinfolist) {
        continue;
      }
      // "Our device info struct"
-      DeviceInfo d;
+      RtAudioDeviceInfo d;
      switch (api) {
      case RtAudio::LINUX_ALSA:
        d.api = rtaudioAlsaApi;
@ -58,7 +70,7 @@ void fillRtAudioDeviceInfo(vector<DeviceInfo> &devinfolist) {
      }

      d.device_name = devinfo.name;
-      d.api_specific_devindex = devno;
+      d._api_devindex = devno;

      /// When 48k is available we overwrite the default sample rate with the 48
      /// kHz value, which is our preffered rate,
@ -118,7 +130,7 @@ void fillRtAudioDeviceInfo(vector<DeviceInfo> &devinfolist) {
      d.availableFramesPerBlock = {512, 1024, 2048, 4096, 8192};
      d.prefFramesPerBlockIndex = 2;

-      devinfolist.push_back(d);
+      devinfolist.push_back(std::make_unique<RtAudioDeviceInfo>(d));
    }
  }
 }
@ -143,9 +155,9 @@ class RtAudioDaq : public Daq {
  std::atomic<StreamStatus> _streamStatus{};

 public:
-  RtAudioDaq(const DeviceInfo &devinfo, const DaqConfiguration &config)
-      : Daq(devinfo, config),
-        rtaudio(static_cast<RtAudio::Api>(devinfo.api.api_specific_subcode)),
+  RtAudioDaq(const DeviceInfo &devinfo_gen, const DaqConfiguration &config)
+      : Daq(devinfo_gen, config), rtaudio(static_cast<RtAudio::Api>(
+                                      devinfo_gen.api.api_specific_subcode)),
        nFramesPerBlock(Daq::framesPerBlock()) {

    DEBUGTRACE_ENTER;
@ -156,6 +168,8 @@ public:
      throw rte("RtAudio backend cannot run in duplex mode.");
    }
    assert(!monitorOutput);
+    const RtAudioDeviceInfo &devinfo =
+        static_cast<const RtAudioDeviceInfo &>(devinfo_gen);

    std::unique_ptr<RtAudio::StreamParameters> inParams, outParams;

@ -169,7 +183,7 @@ public:
        throw rte("Invalid input number of channels");
      }
      inParams->firstChannel = 0;
-      inParams->deviceId = devinfo.api_specific_devindex;
+      inParams->deviceId = devinfo._api_devindex;

    } else {

@ -180,7 +194,7 @@ public:
        throw rte("Invalid output number of channels");
      }
      outParams->firstChannel = 0;
-      outParams->deviceId = devinfo.api_specific_devindex;
+      outParams->deviceId = devinfo._api_devindex;
    }

    RtAudio::StreamOptions streamoptions;
--- a/src/lasp/device/lasp_rtaudiodaq.h
+++ b/src/lasp/device/lasp_rtaudiodaq.h
@ -10,5 +10,5 @@ std::unique_ptr<Daq> createRtAudioDevice(const DeviceInfo& devinfo,
 *
 * @param devinfolist List to append to
 */
-void fillRtAudioDeviceInfo(std::vector<DeviceInfo> &devinfolist);
+void fillRtAudioDeviceInfo(DeviceInfoList &devinfolist);

--- a/src/lasp/device/lasp_streammgr.cpp
+++ b/src/lasp/device/lasp_streammgr.cpp
@ -261,22 +261,23 @@ void StreamMgr::startStream(const DaqConfiguration &config) {
                                [](auto &i) { return i.enabled; });

  // Find the first device that matches with the configuration
+  std::scoped_lock lck(_devices_mtx);

-  DeviceInfo devinfo;
-  {
-    std::scoped_lock lck(_devices_mtx);
+  DeviceInfo *devinfo = nullptr;
+  bool found = false;

-    auto devinfo2 = std::find_if(
-        _devices.cbegin(), _devices.cend(),
-        [&config](const DeviceInfo &d) { return config.match(d); });
-    if (devinfo2 == std::cend(_devices)) {
-      throw rte("Could not find a device with name " + config.device_name +
-                " in list of devices.");
+  for (auto &devinfoi : _devices) {
+    if (config.match(*devinfoi)) {
+      devinfo = devinfoi.get();
+      break;
    }
-    devinfo = *devinfo2;
+  }
+  if (!devinfo) {
+    throw rte("Could not find a device with name " + config.device_name +
+              " in list of devices.");
  }

-  isInput |= (config.monitorOutput && devinfo.hasInternalOutputMonitor);
+  isInput |= (config.monitorOutput && devinfo->hasInternalOutputMonitor);
  DEBUGTRACE_PRINT(isInput);

  bool isDuplex = isInput && isOutput;
@ -300,11 +301,23 @@ void StreamMgr::startStream(const DaqConfiguration &config) {
    }
  }

+  if (_outputStream && isInput && _outputStream->duplexModeForced &&
+      config.match(*_outputStream)) {
+    throw rte("This device is already opened for output. If input is also "
+              "required, please enable duplex mode for this device");
+  }
+
+  if (_inputStream && isOutput && _inputStream->duplexModeForced &&
+      config.match(*_inputStream)) {
+    throw rte("This device is already opened for input. If output is also "
+              "required, please enable duplex mode for this device");
+  }
+
  InDaqCallback inCallback;
  OutDaqCallback outCallback;

  using namespace std::placeholders;
-  std::unique_ptr<Daq> daq = Daq::createDaq(devinfo, config);
+  std::unique_ptr<Daq> daq = Daq::createDaq(*devinfo, config);

  assert(daq);

@ -321,7 +334,7 @@ void StreamMgr::startStream(const DaqConfiguration &config) {
    /// Create input filters
    _inputFilters.clear();
    /// No input filter for monitor channel.
-    if (config.monitorOutput && devinfo.hasInternalOutputMonitor) {
+    if (config.monitorOutput && devinfo->hasInternalOutputMonitor) {
      _inputFilters.push_back(nullptr);
    }
    for (auto &ch : daq->inchannel_config) {
--- a/src/lasp/device/lasp_streammgr.h
+++ b/src/lasp/device/lasp_streammgr.h
@ -107,7 +107,7 @@ class StreamMgr {
  std::mutex _siggen_mtx;

  std::mutex _devices_mtx;
-  std::vector<DeviceInfo> _devices;
+  DeviceInfoList _devices;

  StreamMgr();

@ -145,9 +145,13 @@ class StreamMgr {
   *
   * @return A copy of the internal stored list of devices
   */
-  std::vector<DeviceInfo> getDeviceInfo() const {
+  DeviceInfoList getDeviceInfo() const {
    std::scoped_lock lck(const_cast<std::mutex &>(_devices_mtx));
-    return _devices;
+    DeviceInfoList d2;
+    for(const auto& dev: _devices) {
+      d2.push_back(dev->clone());
+    }
+    return d2;
  }

  /**
--- a/src/lasp/device/lasp_uldaq.cpp
+++ b/src/lasp/device/lasp_uldaq.cpp
@ -6,13 +6,12 @@
 #include "lasp_uldaq_impl.h"
 #include <uldaq.h>

-void fillUlDaqDeviceInfo(std::vector<DeviceInfo> &devinfolist,
-                         void *vDescriptors) {
+
+
+void fillUlDaqDeviceInfo(DeviceInfoList &devinfolist) {

  DEBUGTRACE_ENTER;

-  DaqDeviceDescriptor *descriptors_copy =
-      static_cast<DaqDeviceDescriptor *>(vDescriptors);

  UlError err;
  unsigned int numdevs = MAX_ULDAQ_DEV_COUNT_PER_API;
@ -32,16 +31,14 @@ void fillUlDaqDeviceInfo(std::vector<DeviceInfo> &devinfolist,

    descriptor = devdescriptors[i];

-    // Copy structure over, if given as not nullptr
-    if (descriptors_copy) {
-      descriptors_copy[i] = descriptor;
-    }
+    UlDaqDeviceInfo devinfo;
+    devinfo._uldaqDescriptor = descriptor;

-    DeviceInfo devinfo;
    devinfo.api = uldaqapi;
    string name, interface;
-    if (string(descriptor.productName) != "DT9837A") {
-      throw rte("Unknown UlDAQ type");
+    string productname = descriptor.productName;
+    if (productname != "DT9837A") {
+      throw rte("Unknown UlDAQ type: " + productname);
    }

    switch (descriptor.devInterface) {
@ -66,7 +63,6 @@ void fillUlDaqDeviceInfo(std::vector<DeviceInfo> &devinfolist,

    devinfo.physicalOutputQty = DaqChannel::Qty::Voltage;

-    devinfo.api_specific_devindex = i;
    devinfo.availableDataTypes.push_back(
        DataTypeDescriptor::DataType::dtype_fl64);
    devinfo.prefDataTypeIndex = 0;
@ -91,8 +87,10 @@ void fillUlDaqDeviceInfo(std::vector<DeviceInfo> &devinfolist,

    devinfo.hasInternalOutputMonitor = true;

+    devinfo.duplexModeForced = true;
+
    // Finally, this devinfo is pushed back in list
-    devinfolist.push_back(devinfo);
+    devinfolist.push_back(std::make_unique<UlDaqDeviceInfo>(devinfo));
  }
 }

--- a/src/lasp/device/lasp_uldaq.h
+++ b/src/lasp/device/lasp_uldaq.h
@ -13,10 +13,6 @@ std::unique_ptr<Daq> createUlDaqDevice(const DeviceInfo &devinfo,
 /**
 * @brief Fill device info list with UlDaq specific devices, if any.
 *
- * @param devinfolist Info list to append to
- * @param descriptors Pointer to array
- * DaqDeviceDescriptors[MAX_ULDAQ_DEV_COUNT_PER_API]. If a pointer is given, a
- * copy of the device descriptors is set to the memory of this pointer. We use
- * a void* pointer here to not expose the implementation of UlDaq.
+ * @param devinfolist Info list to append to.
 */
-void fillUlDaqDeviceInfo(std::vector<DeviceInfo>&, void *descriptors = nullptr);
+void fillUlDaqDeviceInfo(DeviceInfoList& devinfolist);
--- a/src/lasp/device/lasp_uldaq_impl.cpp
+++ b/src/lasp/device/lasp_uldaq_impl.cpp
@ -35,7 +35,10 @@ inline void showErr(string errstr) {
  std::cerr << errstr << std::endl;
  std::cerr << "***********************************************\n\n";
 }
-inline void showErr(UlError err) { showErr(getErrMsg(err)); }
+inline void showErr(UlError err) {
+  if (err != ERR_NO_ERROR)
+    showErr(getErrMsg(err));
+}

 DT9837A::~DT9837A() {
  UlError err;
@ -71,21 +74,14 @@ DT9837A::DT9837A(const DeviceInfo &devinfo, const DaqConfiguration &config)
    throw rte("Invalid sample rate");
  }

-  std::vector<DeviceInfo> devs;
-  DaqDeviceDescriptor devdescriptors[MAX_ULDAQ_DEV_COUNT_PER_API];
-  fillUlDaqDeviceInfo(devs, static_cast<void *>(devdescriptors));
-
-  if (devs.size() == 0) {
-    throw rte("Unable to find any UlDaq devices");
-  }
-
-  if (devinfo.api_specific_devindex < 0 ||
-      devinfo.api_specific_devindex >= (int)MAX_ULDAQ_DEV_COUNT_PER_API) {
-    throw rte("Invalid device index");
+  const UlDaqDeviceInfo *_info =
+      dynamic_cast<const UlDaqDeviceInfo *>(&devinfo);
+  if (_info == nullptr) {
+    throw rte("BUG: Could not cast DeviceInfo to UlDaqDeviceInfo");
  }

  // get a handle to the DAQ device associated with the first descriptor
-  _handle = ulCreateDaqDevice(devdescriptors[devinfo.api_specific_devindex]);
+  _handle = ulCreateDaqDevice(_info->_uldaqDescriptor);

  if (_handle == 0) {
    throw rte("Unable to create a handle to the specified DAQ "
--- a/src/lasp/device/lasp_uldaq_impl.h
+++ b/src/lasp/device/lasp_uldaq_impl.h
@ -14,6 +14,19 @@ using std::cerr;
 using std::endl;
 using rte = std::runtime_error;

+/**
+ * @brief UlDaq-specific device information. Adds a copy of the underlying
+ * DaqDeDaqDeviceDescriptor.
+ */
+class UlDaqDeviceInfo : public DeviceInfo {
+
+public:
+  DaqDeviceDescriptor _uldaqDescriptor;
+  virtual std::unique_ptr<DeviceInfo> clone() const {
+    return std::make_unique<UlDaqDeviceInfo>(*this);
+  }
+};
+
 class DT9837A : public Daq {

  DaqDeviceHandle _handle = 0;
@ -123,7 +136,6 @@ public:
   */
  bool operator()();
  ~InBufHandler();
-  
 };
 class OutBufHandler : public BufHandler {
  OutDaqCallback cb;
--- a/src/lasp/dsp/CMakeLists.txt
+++ b/src/lasp/dsp/CMakeLists.txt
@ -15,6 +15,7 @@ set(lasp_dsp_files
    lasp_slm.cpp
    lasp_threadedindatahandler.cpp
    lasp_ppm.cpp
+    lasp_clip.cpp
    )


--- a/src/lasp/dsp/lasp_clip.cpp
+++ b/src/lasp/dsp/lasp_clip.cpp
@ -0,0 +1,94 @@
+/* #define DEBUGTRACE_ENABLED */
+#include "debugtrace.hpp"
+#include "lasp_clip.h"
+#include <mutex>
+
+using std::cerr;
+using std::endl;
+
+using Lck = std::scoped_lock<std::mutex>;
+using rte = std::runtime_error;
+
+ClipHandler::ClipHandler(StreamMgr &mgr)
+  : ThreadedInDataHandler(mgr){
+
+    DEBUGTRACE_ENTER;
+  }
+
+bool ClipHandler::inCallback_threaded(const DaqData &d) {
+
+  DEBUGTRACE_ENTER;
+  Lck lck(_mtx);
+
+  dmat data = d.toFloat();
+
+  const us nchannels = d.nchannels;
+  assert(data.n_cols == nchannels);
+
+  if (nchannels != _clip_time.size()) {
+    DEBUGTRACE_PRINT("Resizing clip indication");
+    _clip_time = vd(nchannels, arma::fill::value(-1));
+  }
+
+  /// Obtain max abs values for each column, convert this row-vec to a column
+  /// vector, and scale with the max-range for each channel
+  vd maxabs = arma::max(arma::abs(data), 0).as_col() / _max_range;
+
+  /// Find indices for channels that have a clip
+  arma::uvec clips = maxabs > clip_point;
+
+  for (us i = 0; i < nchannels; i++) {
+    if (clips(i)) {
+      /// Reset clip counter
+      _clip_time(i) = 0;
+    } else if (_clip_time(i) > clip_indication_time) {
+      /// Reset to 'unclipped'
+      _clip_time(i) = -1;
+    } else if (_clip_time(i) >= 0) {
+      /// Add a bit of clip time
+      _clip_time(i) += _dt;
+    }
+  }
+  return true;
+}
+
+arma::uvec ClipHandler::getCurrentValue() const {
+
+  DEBUGTRACE_ENTER;
+  Lck lck(_mtx);
+
+  arma::uvec clips(_clip_time.size(), arma::fill::zeros);
+  clips.elem(arma::find(_clip_time >= 0)).fill(1);
+
+  return {clips};
+}
+
+void ClipHandler::reset(const Daq *daq) {
+
+  DEBUGTRACE_ENTER;
+  Lck lck(_mtx);
+
+  if (daq) {
+
+    const us nchannels = daq->neninchannels();
+    _max_range.resize(nchannels);
+
+    dvec ranges = daq->inputRangeForEnabledChannels();
+    assert(ranges.size() == nchannels);
+    for(us i=0;i<daq->neninchannels();i++) {
+      _max_range[i] = ranges[i];
+    }
+
+    _clip_time.fill(-1);
+
+    const d fs = daq->samplerate();
+    /* DEBUGTRACE_PRINT(fs); */
+    _dt = daq->framesPerBlock() / fs;
+  }
+}
+
+ClipHandler::~ClipHandler() {
+  DEBUGTRACE_ENTER;
+  Lck lck(_mtx);
+  stop();
+}
--- a/src/lasp/dsp/lasp_clip.h
+++ b/src/lasp/dsp/lasp_clip.h
@ -0,0 +1,77 @@
+// lasp_clip.h
+//
+// Author: J.A. de Jong, C.R.D. Jansen - ASCEE
+//
+// Description: Clip handler
+#pragma once
+#include <memory>
+#include "lasp_filter.h"
+#include "lasp_mathtypes.h"
+#include "lasp_threadedindatahandler.h"
+
+/**
+ * \addtogroup dsp
+ * @{
+ *
+ * \addtogroup rt 
+ * @{
+ */
+
+
+/**
+ * @brief Clipping detector (Clip). Detects when a signal overdrives the input
+ * */
+class ClipHandler: public ThreadedInDataHandler {
+
+  /**
+   * @brief Assuming full scale of a signal is +/- 1.0. If a value is found 
+   */
+  static inline const d clip_point = 0.98;
+
+  /**
+   * @brief How long it takes in [s] after a clip event has happened, that we
+   * are actually still in 'clip' mode.
+   */
+  static inline const d clip_indication_time = 2.0;
+
+  /**
+   * @brief Inverse of block sampling frequency [s]: (framesPerBlock/fs) 
+   */
+  d _dt;
+
+
+  mutable std::mutex _mtx;
+  /**
+   * @brief How long ago the last clip has happened. Negative in case no clip
+   * has happened.
+   */
+  vd _clip_time;
+
+  /**
+   * @brief Storage for maximum values
+   */
+  vd _max_range;
+
+  public:
+  /**
+   * @brief Constructs Clipping indicator
+   *
+   * @param mgr Stream Mgr to operate on
+   */
+  ClipHandler(StreamMgr& mgr);
+  ~ClipHandler();
+
+  /**
+   * @brief Get the current values of the clip handler. Returns a vector of of True's.
+   *
+   * @return clipping indication
+   */
+  arma::uvec getCurrentValue() const;
+
+  bool inCallback_threaded(const DaqData& ) override final;
+  void reset(const Daq*) override final;
+
+};
+
+/** @} */
+/** @} */
--- a/src/lasp/dsp/lasp_fft.cpp
+++ b/src/lasp/dsp/lasp_fft.cpp
@ -135,7 +135,7 @@ cmat Fft::fft(const dmat &freqdata) {
  /// * WARNING *. This was source of a serious bug. It is not possible to run
  /// FFT's and IFFT's on the same _impl, as it overwrites the same memory.
  /// Uncommenting the line below results in faulty results.
-  /// #pragma omp parallel for
+  // #pragma omp parallel for
  for (us colno = 0; colno < freqdata.n_cols; colno++) {
    res.col(colno) = _impl->fft(freqdata.col(colno));
  }
@ -152,7 +152,7 @@ dmat Fft::ifft(const cmat &freqdata) {
  /// * WARNING *. This was source of a serious bug. It is not possible to run
  /// FFT's and IFFT's on the same _impl, as it overwrites the same memory.
  /// Uncommenting the line below results in faulty results.
-  /// #pragma omp parallel for
+  // #pragma omp parallel for

  for (us colno = 0; colno < freqdata.n_cols; colno++) {
    res.col(colno) = _impl->ifft(freqdata.col(colno));
--- a/src/lasp/dsp/lasp_ppm.h
+++ b/src/lasp/dsp/lasp_ppm.h
@ -84,7 +84,14 @@ class PPMHandler: public ThreadedInDataHandler {
   */
  std::tuple<vd,arma::uvec> getCurrentValue() const;

-  bool inCallback_threaded(const DaqData& ) override final;
+  /**
+   * @brief Implements callback on thread
+   *
+   * @param d DaqData to work with
+   *
+   * @return true when stream should continue.
+   */
+  bool inCallback_threaded(const DaqData& d) override final;
  void reset(const Daq*) override final;

 };
--- a/src/lasp/dsp/lasp_rtaps.h
+++ b/src/lasp/dsp/lasp_rtaps.h
@ -46,7 +46,8 @@ public:
   * @param mgr StreamMgr singleton reference
   * @param freqWeightingFilter Optionally: the frequency weighting filter.
   * Nullptr should be given for Z-weighting.
-   * @param For all other arguments, see constructor of AvPowerSpectra
+   * 
+   * For all other arguments, see constructor of AvPowerSpectra
   */
  RtAps(StreamMgr &mgr, const Filter *freqWeightingFilter, const us nfft = 2048,
        const Window::WindowType w = Window::WindowType::Hann,
@ -61,7 +62,14 @@ public:
   */
  ccube getCurrentValue() const;

-  bool inCallback_threaded(const DaqData &) override final;
+  /**
+   * @brief Implements the work to to when new DaqData arrives
+   *
+   * @param d DaqData to use for computing/updating spectra
+   *
+   * @return true if stream should continue.
+   */
+  bool inCallback_threaded(const DaqData & d) override final;
  void reset(const Daq *) override final;
 };

--- a/src/lasp/dsp/lasp_slm.cpp
+++ b/src/lasp/dsp/lasp_slm.cpp
@ -13,28 +13,29 @@ using rte = std::runtime_error;
 using std::unique_ptr;

 SLM::SLM(const d fs, const d Lref, const us downsampling_fac, const d tau,
-    std::unique_ptr<Filter> pre_filter,
-    std::vector<std::unique_ptr<Filter>> bandpass)
-  : _pre_filter(std::move(pre_filter)), _bandpass(std::move(bandpass)),
-  _alpha(exp(-1 / (fs * tau))),
-  _sp_storage(_bandpass.size(), arma::fill::zeros), // Storage for
-  // components of
-  // single pole low pass
-  // filter
-  Lrefsq(Lref*Lref),                                       // Reference level
-  downsampling_fac(downsampling_fac),
+         std::unique_ptr<Filter> pre_filter,
+         std::vector<std::unique_ptr<Filter>> bandpass)
+    : _pre_filter(std::move(pre_filter)), _bandpass(std::move(bandpass)),
+      _alpha(exp(-1 / (fs * tau))),
+      _sp_storage(_bandpass.size(), arma::fill::zeros), // Storage for
+      // components of
+      // single pole low pass
+      // filter
+      Lrefsq(Lref * Lref), // Reference level
+      downsampling_fac(downsampling_fac),

-  // Initalize mean square
-  Pm(_bandpass.size(), arma::fill::zeros),
+      // Initalize mean square
+      Pm(_bandpass.size(), arma::fill::zeros),

-  // Initalize max
-  Pmax(_bandpass.size(), arma::fill::zeros),
+      // Initalize max
+      Pmax(_bandpass.size(), arma::fill::zeros),

-  // Initalize peak
-  Ppeak(_bandpass.size(), arma::fill::zeros)
+      // Initalize peak
+      Ppeak(_bandpass.size(), arma::fill::zeros)

 {
  DEBUGTRACE_ENTER;
+  DEBUGTRACE_PRINT(_alpha);

  // Make sure thread pool is running
  getPool();
@ -42,7 +43,7 @@ SLM::SLM(const d fs, const d Lref, const us downsampling_fac, const d tau,
  if (Lref <= 0) {
    throw rte("Invalid reference level");
  }
-  if (tau <= 0) {
+  if (tau < 0) {
    throw rte("Invalid time constant for Single pole lowpass filter");
  }
  if (fs <= 0) {
@ -66,43 +67,43 @@ std::vector<unique_ptr<Filter>> createBandPass(const dmat &coefs) {
  }
  return bf;
 }
-us SLM::suggestedDownSamplingFac(const d fs,const d tau) {
-  if(tau<0) throw rte("Invalid time weighting time constant");
-  if(fs<=0) throw rte("Invalid sampling frequency");
+us SLM::suggestedDownSamplingFac(const d fs, const d tau) {
+  if (fs <= 0)
+    throw rte("Invalid sampling frequency");
  // A reasonable 'framerate' for the sound level meter, based on the
  // filtering time constant.
  if (tau > 0) {
    d fs_slm = 10 / tau;
-    if(fs_slm < 30) {
+    if (fs_slm < 30) {
      fs_slm = 30;
    }
-    return std::max((us) 1, static_cast<us>(fs / fs_slm));
+    return std::max((us)1, static_cast<us>(fs / fs_slm));
  } else {
    return 1;
  }
 }

 SLM SLM::fromBiquads(const d fs, const d Lref, const us downsampling_fac,
-    const d tau, const vd &pre_filter_coefs,
-    const dmat &bandpass_coefs) {
+                     const d tau, const vd &pre_filter_coefs,
+                     const dmat &bandpass_coefs) {
  DEBUGTRACE_ENTER;

  return SLM(fs, Lref, downsampling_fac, tau,
-      std::make_unique<SeriesBiquad>(pre_filter_coefs),
-      createBandPass(bandpass_coefs));
+             std::make_unique<SeriesBiquad>(pre_filter_coefs),
+             createBandPass(bandpass_coefs));
 }
 SLM SLM::fromBiquads(const d fs, const d Lref, const us downsampling_fac,
-    const d tau, const dmat &bandpass_coefs) {
+                     const d tau, const dmat &bandpass_coefs) {

  DEBUGTRACE_ENTER;

  return SLM(fs, Lref, downsampling_fac, tau,
-      nullptr,                       // Pre-filter
-      createBandPass(bandpass_coefs) // Bandpass coefficients
-      );
+             nullptr,                       // Pre-filter
+             createBandPass(bandpass_coefs) // Bandpass coefficients
+  );
 }

-vd SLM::run_single(vd work,const us i) {
+vd SLM::run_single(vd work, const us i) {

  // Filter input in-place
  _bandpass[i]->filter(work);
@ -126,7 +127,7 @@ vd SLM::run_single(vd work,const us i) {
  for (us j = 0; j < work.n_rows; j++) {
    // Update mean square of signal, work is here still signal power
    Pm(i) = (Pm(i) * static_cast<d>(N_local) + work(j)) /
-      (static_cast<d>(N_local) + 1);
+            (static_cast<d>(N_local) + 1);

    N_local++;

@ -142,7 +143,7 @@ vd SLM::run_single(vd work,const us i) {
  Pmax(i) = std::max(Pmax(i), arma::max(work));

  // Convert to levels in dB
-  work = 10*arma::log10((work+arma::datum::eps)/Lrefsq);
+  work = 10 * arma::log10((work + arma::datum::eps) / Lrefsq);

  return work;
 }
@ -170,8 +171,8 @@ dmat SLM::run(const vd &input_orig) {
    /* DEBUGTRACE_PRINT(res.n_rows); */
    /* DEBUGTRACE_PRINT(futs.size()); */

-    // Update the total number of samples harvested so far. NOTE: *This should be
-    // done AFTER the threads are done!!!*
+    // Update the total number of samples harvested so far. NOTE: *This should
+    // be done AFTER the threads are done!!!*
  }
  N += input.n_rows;

--- a/src/lasp/dsp/lasp_threadedindatahandler.h
+++ b/src/lasp/dsp/lasp_threadedindatahandler.h
@ -51,11 +51,11 @@ class ThreadedInDataHandler: public InDataHandler {
   * @brief This function should be overridden with an actual implementation,
   * of what should happen on a different thread.
   *
-   * @param DaqData Input daq data
+   * @param d Input daq data
   *
   * @return true on succes. False when an error occured.
   */
-  virtual bool inCallback_threaded(const DaqData&) = 0;
+  virtual bool inCallback_threaded(const DaqData& d) = 0;

 };

--- a/src/lasp/filter/filterbank_design.py
+++ b/src/lasp/filter/filterbank_design.py
@ -85,8 +85,8 @@ class FilterBankDesigner:
            if self.nominal_txt(x) == nom_txt:
                return x
        raise ValueError(
-            f'Could not find a nominal frequency corresponding to {nom_txt}. Hint: use \'5k\' instead of \'5000\'.'
-        )
+            f'Could not find a nominal frequency corresponding to {nom_txt}. '
+            'Hint: use \'5k\' instead of \'5000\'.')

    def sanitize_input(self, input_):
        if isinstance(input_, int):
@ -172,7 +172,6 @@ class FilterBankDesigner:
        Args:
            x: Band designator
        """
-
        SOS_ORDER = 5

        fs = self.fs
@ -186,6 +185,18 @@ class FilterBankDesigner:
        x = self.sanitize_input(x)
        fu_n = fu / fnyq

+        # Handle fl & fu >= fNyquist: return 'no pass'
+        if fl_n >= 1:
+            return np.tile(np.asarray([0, 0, 0, 1, 0, 0]), (SOS_ORDER, 1))
+
+        # Handle fu >= fNyquist: return high pass
+        if fu_n >= 1:
+            highpass = butter(SOS_ORDER, fl_n, output='sos', btype='highpass')
+            allpass = np.tile(np.asarray([1, 0, 0, 1, 0, 0]),
+                              (SOS_ORDER-highpass.shape[0], 1))
+            return np.vstack((highpass, allpass))  # same shape=(SOS_ORDER, 6)
+
+        # Regular bands
        return butter(SOS_ORDER, [fl_n, fu_n], output='sos', btype='band')

    def firFreqResponse(self, x, freq):
@ -254,8 +265,8 @@ class FilterBankDesigner:
            for i, x in enumerate(range(xl, xu + 1)):
                fl = self.fl(x)
                fu = self.fu(x)
-                # Find the indices in the frequency array which correspond to the
-                # frequency band x
+                # Find the indices in the frequency array which correspond to
+                # the frequency band x
                if x != xu:
                    indices_cur = np.where((freq >= fl) & (freq < fu))
                else:
@ -330,20 +341,20 @@ class OctaveBankDesigner(FilterBankDesigner):
    @property
    def xs(self):
        """All possible band designators for an octave band filter."""
-        return list(range(-6, 5))
+        return list(range(-7, 5))

    def band_limits(self, x, filter_class=0):
        """Returns the octave band filter limits for filter designator x.

        Args:
            x: Filter offset power from the reference frequency of 1000 Hz.
-            filter_class: Either 0 or 1, defines the tolerances on the frequency
-            response
+            filter_class: Either 0 or 1, defines the tolerances on the
+            frequency response

        Returns:
-            freq, llim, ulim: Tuple of Numpy arrays containing the frequencies of
-            the corner points of the filter frequency response limits, lower limits
-            in *deciBell*, upper limits in *deciBell*, respectively.
+            freq, llim, ulim: Tuple of Numpy arrays containing the frequencies
+            of the corner points of the filter frequency response limits, lower
+            limits in *deciBell*, upper limits in *deciBell*, respectively.
        """
        b = 1

@ -393,7 +404,8 @@ class OctaveBankDesigner(FilterBankDesigner):
            -3: '125',
            -4: '63',
            -5: '31.5',
-            -6: '16'
+            -6: '16',
+            -7: '8'
        }
        assert len(nominals) == len(self.xs)
        return nominals[x]
@ -450,8 +462,7 @@ class OctaveBankDesigner(FilterBankDesigner):
        if int(self.fs) in [44100, 48000, 96000]:
            return 1.0
        else:
-            raise ValueError('Unimplemented sampling frequency for SOS'
-                             'filter design')
+            return 1.0

    def sosFac_u(self, x):
        """Right side percentage of change in cut-on frequency for designing
@ -463,8 +474,7 @@ class OctaveBankDesigner(FilterBankDesigner):
        if int(self.fs) in [44100, 48000, 96000]:
            return 1.0
        else:
-            raise ValueError('Unimplemented sampling frequency for SOS'
-                             'filter design')
+            return 1.0


 class ThirdOctaveBankDesigner(FilterBankDesigner):
@ -475,18 +485,16 @@ class ThirdOctaveBankDesigner(FilterBankDesigner):
        one-third octave bands

        Args:
-            fs: Sampling frequency in [Hz]
-
+            fs: Sampling frequency in [Hz] - can be None
        """
        super().__init__(fs)
-        self.xs = list(range(-16, 14))
+        self.xs = list(range(-19, 14))
        # Text corresponding to the nominal frequency
-        self._nominal_txt = [
+        self._nominal_txt = ['12.5', '16', '20',
            '25', '31.5', '40', '50', '63', '80', '100', '125', '160', '200',
            '250', '315', '400', '500', '630', '800', '1k', '1.25k', '1.6k',
            '2k', '2.5k', '3.15k', '4k', '5k', '6.3k', '8k', '10k', '12.5k',
-            '16k', '20k'
-        ]
+            '16k', '20k']

        assert len(self.xs) == len(self._nominal_txt)

@ -511,13 +519,13 @@ class ThirdOctaveBankDesigner(FilterBankDesigner):

        Args:
            x: Filter offset power from the reference frequency of 1000 Hz.
-            filter_class: Either 0 or 1, defines the tolerances on the frequency
-            response
+            filter_class: Either 0 or 1, defines the tolerances on the
+            frequency response

        Returns:
-            freq, llim, ulim: Tuple of Numpy arrays containing the frequencies of
-            the corner points of the filter frequency response limits, lower limits
-            in *deciBell*, upper limits in *deciBell*, respectively.
+            freq, llim, ulim: Tuple of Numpy arrays containing the frequencies
+            of the corner points of the filter frequency response limits, lower
+            limits in *deciBell*, upper limits in *deciBell*, respectively.
        """

        fm = self.G**(x / self.b) * self.fr
@ -603,25 +611,15 @@ class ThirdOctaveBankDesigner(FilterBankDesigner):
        """Left side percentage of change in cut-on frequency for designing the
        filter."""
        # Idea: correct for frequency warping:
-        if np.isclose(self.fs, 48000):
-            return 1.00
-        elif np.isclose(self.fs, 41000):
-            warnings.warn(
-                f'Frequency {self.fs} might not result in correct filters')
-
-            return 1.00
-        elif np.isclose(self.fs, 32768):
-            return 1.00
+        if int(self.fs) in [48000]:
+            return 1.0
        else:
-            raise ValueError('Unimplemented sampling frequency for SOS'
-                             'filter design')
+            return 1.0
+
    def sosFac_u(self, x):
        """Right side percentage of change in cut-on frequency for designing
        the filter."""
-        if np.isclose(self.fs, 48000):
-            return 1
-        elif np.isclose(self.fs, 32768):
-            return 1.00
+        if int(self.fs) in [48000]:
+            return 1.0
        else:
-            raise ValueError('Unimplemented sampling frequency for SOS'
-                             'filter design')
+            return 1.0
--- a/src/lasp/lasp_common.py
+++ b/src/lasp/lasp_common.py
@ -286,46 +286,57 @@ class this_lasp_shelve(Shelve):
        return os.path.join(lasp_appdir, f'{node}_config.shelve')

 class TimeWeighting:
-    none = (-1, 'Raw (no time weighting)')
+    # This is not actually a time weighting
+    none = (0, 'Raw (no time weighting)')
+
    uufast = (1e-4, '0.1 ms')
    ufast = (35e-3, 'Impulse (35 ms)')
    fast = (0.125, 'Fast (0.125 s)')
    slow = (1.0, 'Slow (1.0 s)')
    tens = (10., '10 s')
-    infinite = (0, 'Infinite')
-    types_realtime = (ufast, fast, slow, tens, infinite)
-    types_all = (none, uufast, ufast, fast, slow, tens, infinite)
+
+    # All-averaging: compute the current average of all history. Kind of the
+    # equivalent level. Only useful for power spectra. For Sound Level Meter,
+    # equivalent levels does that thing.
+    averaging = (-1, 'All-averaging')
+
+    types_all = (none, uufast, ufast, fast, slow, tens, averaging)
+
+    # Used for combobox of realt time power spectra
+    types_realtimeaps = (ufast, fast, slow, tens, averaging)
+    # Used for combobox of realt time sound level meter
+    types_realtimeslm = (ufast, fast, slow, tens)
+
+    # Used for combobox of sound level meter - time dependent
+    types_slmt = (none, uufast, ufast, fast, slow, tens)
+
+    # Used for combobox of sound level meter - Lmax statistics
+    types_slmstats = (uufast, ufast, fast, slow, tens)

    default = fast
-    default_index = 3
-    default_index_realtime = 1

    @staticmethod
-    def fillComboBox(cb, realtime=False):
+    def fillComboBox(cb, types):
        """
        Fill TimeWeightings to a combobox

        Args:
            cb: QComboBox to fill
+            types: The types to fill it with
        """
        cb.clear()
-        if realtime:
-            types = TimeWeighting.types_realtime
-            defindex = TimeWeighting.default_index_realtime
-        else:
-            types = TimeWeighting.types_all
-            defindex = TimeWeighting.default_index
+
+        logging.debug(f'{types}')
        for tw in types:
            cb.addItem(tw[1], tw)
-
-        cb.setCurrentIndex(defindex)
+            if TimeWeighting.default == tw:
+                cb.setCurrentIndex(cb.count()-1)

    @staticmethod
    def getCurrent(cb):
-        if cb.count() == len(TimeWeighting.types_realtime):
-            return TimeWeighting.types_realtime[cb.currentIndex()]
-        else:
-            return TimeWeighting.types_all[cb.currentIndex()]
+        for type in TimeWeighting.types_all:
+            if cb.currentText() == type[1]:
+                return type


 class FreqWeighting:
--- a/src/lasp/lasp_cpp.cpp
+++ b/src/lasp/lasp_cpp.cpp
@ -8,14 +8,23 @@
 * Welcome to the LASP (Library for Acoustic Signal Processing) code
 * documentation. The code comprises a part which is written in C++, a part
 * that is written in Python, and a part that functions as glue, which is
- * Pybind11 C++ glue code. An example of such a file is the current one.
+ * Pybind11 C++ glue code. An example of such a file is lasp_cpp.cpp.
+ * This is the internal documentation of LASP. It serves as background
+ * information for programmers.
 *
 * \section Installation
 *
- * For the installation manual, please refer to the README.md of the Git
- * repository. It is recommended to install the software from source.
+ * For the installation manual, please refer to the <a
+ * href="https://code.ascee.nl/ASCEE/lasp/src/branch/master/README.md">README</a>
+ * of the Git repository.
 *
 *
+ * \section Usage
+ *
+ * Some usage examples are given in the <a href=
+ * "https://code.ascee.nl/ASCEE/lasp/src/branch/master/examples">examples</a>
+ * directory of the repository.
+ *
 * */

 /**
@ -48,7 +57,6 @@ PYBIND11_MODULE(lasp_cpp, m) {
  m.attr("__version__") = std::to_string(LASP_VERSION_MAJOR) + "." +
                          std::to_string(LASP_VERSION_MINOR);

-
  m.attr("LASP_VERSION_MAJOR") = LASP_VERSION_MAJOR;
  m.attr("LASP_VERSION_MINOR") = LASP_VERSION_MINOR;
 }
--- a/src/lasp/lasp_measurement.py
+++ b/src/lasp/lasp_measurement.py
@ -196,7 +196,7 @@ class Measurement:

        # Open the h5 file in read-plus mode, to allow for changing the
        # measurement comment.
-        with h5.File(fn, 'r+') as f:
+        with h5.File(fn, 'r') as f:
            # Check for video data
            try:
                f['video']
@ -234,10 +234,9 @@ class Measurement:
                    self._channelNames = [f'Unnamed {i}' for i in range(self.nchannels)]

            # comment = read-write thing
-            try:
+            if 'comment' in f.keys():
                self._comment = f.attrs['comment']
-            except KeyError:
-                f.attrs['comment'] = ''
+            else:
                self._comment = ''

            # Sensitivity
--- a/src/lasp/lasp_measurementset.py
+++ b/src/lasp/lasp_measurementset.py
@ -0,0 +1,66 @@
+"""
+Provides class MeasurementSet, a class used to perform checks and adjustments
+on a group of measurements at the same time.
+
+"""
+__all__ = ['MeasurementSet']
+from .lasp_measurement import Measurement
+from typing import List
+
+
+class MeasurementSet(list):
+    """
+    Group of measurements that have some correspondence to one another. Class
+    is used to operate on multiple measurements at once.
+
+    """
+    def __init__(self, mlist: List[Measurement] =[]):
+        """
+        Initialize a measurement set
+
+        Args:
+            mlist: Measurement list
+
+        """
+        if any([not isinstance(i, Measurement) for i in mlist]):
+            raise TypeError('Object in list should be of Measurement type')
+
+        super().__init__(mlist)
+
+    def measTimeSame(self):
+        """
+        Returns True if all measurements have the same measurement
+        time (recorded time)
+
+        """
+        if len(self) > 0:
+            first = self[0].N
+            return all([first == meas.N for meas in self])
+        else:
+            return False
+
+    def measSimilar(self):
+        """
+        Similar means: channel metadata is the same, and the measurement time
+        is the same. It means that the recorded data is, of course, different.
+
+        Returns:
+            True if measChannelsSame() and measTimeSame() else False
+
+        """
+        return self.measTimeSame() and self.measChannelsSame()
+
+
+    def measChannelsSame(self):
+        """
+        This method is used to check whether a set of measurements can be
+        accessed in a loop, i.e. for computing power spectra or sound levels on
+        a set of measurements, simultaneously. If the channel data is the same
+        (name, sensitivity, ...) it returns True.
+        """
+        if len(self) > 0:
+            first = self[0].channelConfig
+            return all([first == meas.channelConfig for meas in self])
+        else:
+            return False
+
--- a/src/lasp/lasp_slm.py
+++ b/src/lasp/lasp_slm.py
@ -32,10 +32,10 @@ class SLM:
    def __init__(self,
                 fs,
                 fbdesigner=None,
-                 tw: TimeWeighting =TimeWeighting.fast,
-                 fw: FreqWeighting =FreqWeighting.A,
-                 xmin = None,
-                 xmax = None,
+                 tw: TimeWeighting = TimeWeighting.fast,
+                 fw: FreqWeighting = FreqWeighting.A,
+                 xmin=None,
+                 xmax=None,
                 include_overall=True,
                 level_ref_value=P_REF,
                 offset_t=0):
@ -72,7 +72,8 @@ class SLM:
        self.xs = list(range(xmin, xmax + 1))

        nfilters = len(self.xs)
-        if include_overall: nfilters +=1
+        if include_overall:
+            nfilters += 1
        self.include_overall = include_overall
        self.offset_t = offset_t

@ -91,7 +92,7 @@ class SLM:

        # This is a bit of a hack, as the 5 is hard-encoded here, but should in
        # fact be coming from somewhere else..
-        sos_overall = np.array([1,0,0,1,0,0]*5, dtype=float)
+        sos_overall = np.array([1, 0, 0, 1, 0, 0]*5, dtype=float)

        if fbdesigner is not None:
            assert fbdesigner.fs == fs
@ -108,14 +109,14 @@ class SLM:
                # Create a unit impulse response filter, every third index equals
                # 1, so b0 = 1 and a0 is 1 (by definition)
                # a0 = 1, b0 = 1, rest is zero
-                sos[:,-1] = sos_overall
+                sos[:, -1] = sos_overall
                self.nom_txt.append('overall')

        else:
            # No filterbank, means we do only compute the overall values. This
            # means that in case of include_overall, it creates two overall
            # channels. That would be confusing, so we do not allow it.
-            sos = sos_overall[:,np.newaxis]
+            sos = sos_overall[:, np.newaxis]
            self.nom_txt.append('overall')

        # Downsampling factor, determine from single pole low pass filter time
@ -137,7 +138,6 @@ class SLM:
        # Initialize counter to 0
        self.N = 0

-
    def run(self, data):
        """
        Add new fresh timedata to the Sound Level Meter
@ -169,7 +169,6 @@ class SLM:

        return output

-
    def return_as_dict(self, dat):
        """
        Helper function used to return resulting data in a proper way.
--- a/src/lasp/pybind11/lasp_pyindatahandler.cpp
+++ b/src/lasp/pybind11/lasp_pyindatahandler.cpp
@ -2,6 +2,7 @@
 #include "arma_npy.h"
 #include "debugtrace.hpp"
 #include "lasp_ppm.h"
+#include "lasp_clip.h"
 #include "lasp_rtaps.h"
 #include "lasp_rtsignalviewer.h"
 #include "lasp_streammgr.h"
@ -192,6 +193,17 @@ void init_datahandler(py::module &m) {
                          ColToNpy<arma::uword>(std::get<1>(tp)));
  });

+  /// Clip Detector
+  py::class_<ClipHandler, ThreadedInDataHandler> clip(m, "ClipHandler");
+  clip.def(py::init<StreamMgr &>());
+
+  clip.def("getCurrentValue", [](const ClipHandler &clip) {
+
+    arma::uvec cval = clip.getCurrentValue();
+
+    return ColToNpy<arma::uword>(cval); // something goes wrong here
+  });
+
  /// Real time Aps
  ///
  py::class_<RtAps, ThreadedInDataHandler> rtaps(m, "RtAps");
--- a/src/lasp/tools/tools.py
+++ b/src/lasp/tools/tools.py
@ -78,6 +78,70 @@ class SmoothingType:
 # TO DO: add possibility to insert data that is not lin spaced in frequency


+def smoothCalcMatrix(freq, sw: SmoothingWidth):
+    """
+    Args:
+        freq: array of frequencies of data points [Hz] - equally spaced
+        sw: SmoothingWidth
+
+    Returns:
+        freq: array frequencies of data points [Hz]
+        Q: matrix to smooth power:  {fsm} = [Q] * {fraw}
+
+    Warning: this method does not work on levels (dB)
+    """
+    # Settings
+    tr = 2  # truncate window after 2x std; shorter is faster and less accurate
+    Noct = sw.value[0]
+    assert Noct > 0, "'Noct' must be absolute positive"
+    if Noct < 1:
+        raise Warning('Check if \'Noct\' is entered correctly')
+
+    # Initialize
+    L = len(freq)
+    Q = np.zeros(shape=(L, L), dtype=np.float16)  # float16: keep size small
+
+    x0 = 1 if freq[0] == 0 else 0  # Skip first data point if zero frequency
+    # Loop over indices of raw frequency vector
+    for x in range(x0, L):
+        # Find indices of data points to calculate current (smoothed) magnitude
+        #
+        # Indices beyond [0, L] point to non-existing data. Beyond 0 does not
+        # occur in this implementation. Beyond L occurs when the smoothing
+        # window nears the end of the series.
+        # If one end of the window is truncated, the other end
+        # could be truncated as well, to prevent an error on magnitude data
+        # with a slope. It however results in unsmoothed looking data at the
+        # end.
+        fc = freq[x]            # center freq. of smoothing window
+        fl = fc / np.sqrt(2**(tr/Noct))  # lower cutoff
+        fu = fc * np.sqrt(2**(tr/Noct))  # upper cutoff
+
+        # If the upper (frequency) side of the window is truncated because
+        # there is no data beyond the Nyquist frequency, also truncate the
+        # other side to keep it symmetric in a log(frequency) scale.
+        # So: fu / fc = fc / fl
+        fNq = freq[-1]
+        if fu > fNq:
+            fu = fNq  # no data beyond fNq
+            fl = fc**2 / fu  # keep window symmetric
+
+        # Find indices corresponding to frequencies
+        xl = bisect.bisect_left(freq, fl)  # index corresponding to fl
+        xu = bisect.bisect_left(freq, fu)
+
+        xl = xu-1 if xu-xl <= 0 else xl  # Guarantee window length of at least 1
+
+        # Calculate window
+        xg = np.arange(xl, xu)  # indices
+        fg = freq[xg]           # [Hz] corresponding freq
+        gs = np.sqrt( 1/ ((1+((fg/fc - fc/fg)*(1.507*Noct))**6)) )  # raw windw
+        gs /= np.sum(gs)        # normalize: integral=1
+        Q[x, xl:xu] = gs        # add to matrix
+
+    return Q
+
+
 def smoothSpectralData(freq, M, sw: SmoothingWidth,
                       st: SmoothingType = SmoothingType.levels):
    """
@ -91,6 +155,10 @@ def smoothSpectralData(freq, M, sw: SmoothingWidth,
    side. The deviation is largest when Noct is small (e.g. coarse smoothing).
    Casper Jansen, 07-05-2021

+    Update 16-01-2023: speed up algorithm
+        - Smoothing is performed using matrix multiplication
+        - The smoothing matrix is not calculated if it already exists
+
    Args:
        freq: array of frequencies of data points [Hz] - equally spaced
        M: array of either power, transfer functin or dB points. Depending on
@ -103,9 +171,6 @@ def smoothSpectralData(freq, M, sw: SmoothingWidth,
    """
    # TODO: Make this function multi-dimensional array aware.

-    # Settings
-    tr = 2  # truncate window after 2x std; shorter is faster and less accurate
-
    # Safety
    MM = copy.deepcopy(M)
    Noct = sw.value[0]
@ -134,169 +199,33 @@ def smoothSpectralData(freq, M, sw: SmoothingWidth,

    # P is power while smoothing. x are indices of P.
    Psm = np.zeros_like(P)         # Smoothed power - to be calculated
-    x0 = 1 if freq[0] == 0 else 0  # Skip first data point if zero frequency
-    Psm[0] = P[0]                  # Reuse old value in case first data..
+    if freq[0] == 0:
+        Psm[0] = P[0]              # Reuse old value in case first data..
                                   # ..point is skipped. Not plotted any way.

-    # Loop through data points
-    for x in range(x0, L):
-        # Find indices of data points to calculate current (smoothed) magnitude
-        #
-        # Indices beyond [0, L] point to non-existing data. Beyond 0 does not
-        # occur in this implementation. Beyond L occurs when the smoothing
-        # window nears the end of the series.
-        # If one end of the window is truncated, the other end
-        # could be truncated as well, to prevent an error on magnitude data
-        # with a slope. It however results in unsmoothed looking data at the
-        # end.
-        fc = freq[x]            # center freq. of smoothing window
-        fl = fc / np.sqrt(2**(tr/Noct))  # lower cutoff
-        fu = fc * np.sqrt(2**(tr/Noct))  # upper cutoff
+    # Re-use smoothing matrix Q if available. Otherwise, calculate.
+    # Store in dict 'Qdict'
+    nfft = int(2*(len(freq)-1))
+    key = f"nfft{nfft}_Noct{Noct}"  # matrix name

-        # If the upper (frequency) side of the window is truncated because
-        # there is no data beyond the Nyquist frequency, also truncate the
-        # other side to keep it symmetric in a log(frequency) scale.
-        # So: fu / fc = fc / fl
-        fNq = freq[-1]
-        if fu > fNq:
-            fu = fNq  # no data beyond fNq
-            fl = fc**2 / fu  # keep window symmetric
+    if 'Qdict' not in globals():  # Guarantee Qdict exists
+        global Qdict
+        Qdict = {}

-        # Find indices corresponding to frequencies
-        xl = bisect.bisect_left(freq, fl)  # index corresponding to fl
-        xu = bisect.bisect_left(freq, fu)
+    if key in Qdict:
+        Q = Qdict[key]
+    else:
+        Q = smoothCalcMatrix(freq, sw)
+        Qdict[key] = Q

-        # Guarantee window length of at least 1
-        if xu - xl <= 0:
-            xl = xu - 1
-
-        # Calculate window
-        g = np.zeros(xu-xl)
-        for n, xi in enumerate(range(xl, xu)):
-            fi = freq[xi]  # current frequency
-            g[n] = np.sqrt( 1/ ((1+((fi/fc - fc/fi)*(1.507*Noct))**6)) )
-        g /= np.sum(g)  # normalize: integral=1
-
-        # Apply smoothing
-        Psm[x] = np.dot(g, P[xl:xu])
+    # Apply smoothing
+    Psm = np.matmul(Q, P)

    if st == SmoothingType.levels:
        Psm = 10*np.log10(Psm)

    return Psm

-## OLD VERSION
-#from scipy.signal.windows import gaussian
-#def smoothSpectralData(freq, M, sw: SmoothingWidth,
-#                       st: SmoothingType = SmoothingType.levels):
-#    """
-#    Apply fractional octave smoothing to magnitude data in frequency domain.
-#    Smoothing is performed to power, using a sliding Gaussian window with
-#    variable length. The window is truncated after 2x std at either side.
-#
-#    The implementation is not exact, because f is linearly spaced and
-#    fractional octave smoothing is related to log spaced data. In this
-#    implementation, the window extends with a fixed frequency step to either
-#    side. The deviation is largest when Noct is small (e.g. coarse smoothing).
-#    Casper Jansen, 07-05-2021
-#
-#    Args:
-#        freq: array of frequencies of data points [Hz] - equally spaced
-#        M: array of either power, transfer functin or dB points. Depending on
-#        the smoothing type `st`, the smoothing is applied.
-#
-#    Returns:
-#        freq : array frequencies of data points [Hz]
-#        Msm : float smoothed magnitude of data points
-#
-#    """
-#    # TODO: Make this function multi-dimensional array aware.
-#
-#    # Settings
-#    tr = 2  # truncate window after 2x std; shorter is faster and less accurate
-#
-#    # Safety
-#    Noct = sw.value[0]
-#    assert Noct > 0, "'Noct' must be absolute positive"
-#    if Noct < 1: raise Warning('Check if \'Noct\' is entered correctly')
-#    assert len(freq)==len(M), 'f and M should have equal length'
-#
-#    if st == SmoothingType.ps:
-#        assert np.min(M) >= 0, 'absolute magnitude M cannot be negative'
-#    if st == SmoothingType.levels and isinstance(M.dtype, complex):
-#        raise RuntimeError('Decibel input should be real-valued')
-#
-#    # Initialize
-#    L = M.shape[0]                   # number of data points
-#    
-#    P = M
-#    if st == SmoothingType.levels:
-#        P = 10**(P/10)
-#    # TODO: This does not work due to complex numbers. Should be split up in
-#    # magnitude and phase.
-#    # elif st == SmoothingType.tf:
-#    #     P = P**2
-#
-#    # P is power while smoothing. x are indices of P.
-#    Psm = np.zeros_like(P)           # Smoothed power - to be calculated
-#    x0 = 1 if freq[0]==0 else 0      # Skip first data point if zero frequency
-#    Psm[0] = P[0]                    # Reuse old value in case first data..
-#                                     # ..point is skipped. Not plotted any way.
-#    df = freq[1] - freq[0]           # Frequency step
-#
-#    # Loop through data points
-#    for x in range(x0, L):
-#        # Find indices of data points to calculate current (smoothed) magnitude
-#        fc = freq[x]            # center freq. of smoothing window
-#        Df = tr * fc / Noct  # freq. range of smoothing window
-#
-#        # desired lower index of frequency array to be used during smoothing
-#        xl = int(np.ceil(x - 0.5*Df/df))  
-#
-#        # upper index + 1 (because half-open interval)
-#        xu = int(np.floor(x + 0.5*Df/df)) + 1 
-#
-#        # Create window, suitable for frequency lin-spaced data points 
-#        Np = xu - xl  # number of points
-#        std = Np / (2 * tr)
-#        wind = gaussian(Np, std)  # Gaussian window
-#
-#        # Clip indices to valid range
-#        #
-#        # Indices beyond [0, L] point to non-existing data. This occurs when
-#        # the smoothing windows nears the beginning or end of the series.
-#        # Optional: if one end of the window is clipped, the other end
-#        # could be clipped as well, to prevent an error on magnitude data with
-#        # a slope. It however results in unsmoothed looking data at the ends.
-#        if xl < 0:
-#            rl = 0 - xl       # remove this number of points at the lower end
-#            xl = xl + rl      # .. from f
-#            wind = wind[rl:]  # .. and from window
-#
-#            # rl = 0 - xl      # remove this number of points at the lower end
-#            # xl = xl + rl     # .. from f
-#            # xu = xu - rl
-#            # wind = wind[rl:-rl]  # .. and from window
-#
-#        if xu > L:
-#            ru = xu - L       # remove this number of points at the upper end
-#            xu = xu - ru
-#            wind = wind[:-ru]
-#
-#            # ru = xu - L     # remove this number of points at the upper end
-#            # xl = xl + ru
-#            # xu = xu - ru
-#            # wind = wind[ru:-ru]
-#
-#        # Apply smoothing
-#        wind_int = np.sum(wind)  # integral
-#        Psm[x] = np.dot(wind, P[xl:xu]) / wind_int  # apply window
-#
-#    if st == SmoothingType.levels:
-#        Psm = 10*np.log10(Psm)
-#
-#    return Psm
-

 # %% Test
 if __name__ == "__main__":
@ -310,7 +239,7 @@ if __name__ == "__main__":
    Noct = 2  # Noct = 6 for 1/6 oct. smoothing

    # Create dummy data set 1: noise
-    fmin = 3e3   # [Hz] min freq
+    fmin = 1e3   # [Hz] min freq
    fmax = 24e3  # [Hz] max freq
    Ndata = 200  # number of data points
    freq = np.linspace(fmin, fmax, Ndata)  # frequency points
@ -330,10 +259,13 @@ if __name__ == "__main__":
    class sw:
        value = [Noct]
    st = SmoothingType.levels  # so data is given in dB
+    # st = SmoothingType.ps  # so data is given in power

+    # Smooth
    Msm = smoothSpectralData(freq, M, sw, st)
    fsm = freq

+
    # Plot - lin frequency
    plt.figure()
    plt.plot(freq, M, '.b')
@ -342,12 +274,14 @@ if __name__ == "__main__":
    plt.ylabel('magnitude')
    plt.xlim([100, fmax])
    plt.title('lin frequency')
+    plt.legend(['Raw', 'Smooth'])

    # Plot - log frequency
    plt.figure()
    plt.semilogx(freq, M, '.b')
-    plt.semilogx(fsm, Msm,  'r')
+    plt.semilogx(fsm, Msm, 'r')
    plt.xlabel('f (Hz)')
    plt.ylabel('magnitude')
    plt.xlim([100, fmax])
    plt.title('log frequency')
+    plt.legend(['Raw', 'Smooth 1'])
--- a/test/scipy_sos_thirdoctavebank.py
+++ b/test/scipy_sos_thirdoctavebank.py
@ -0,0 +1,77 @@
+"""
+This script checks whether the 3rd octave equalizer is norm compliant.
+
+Created on Tue Dec 31 14:43:19 2019
+@author: anne
+"""
+
+from lasp.filter import (ThirdOctaveBankDesigner)
+import matplotlib.pyplot as plt
+import numpy as np
+from scipy.signal import freqz, iirdesign, sosfreqz, butter, cheby2
+
+
+plt.close('all')
+
+
+# %% Run check
+def check_one(fs):
+    """Check for fs = fs"""
+    # Create filter bank
+    nsections = 5  # filter property
+    designer = ThirdOctaveBankDesigner(fs)
+
+    # Test
+    xmin = designer.nominal_txt_tox('25')  # lowest highest band, nominal name
+    xmax = designer.nominal_txt_tox('20k')  # highest band
+
+    compliant = True  # remains True if all filters comply
+    fnyq = fs/2
+    fll = designer.fl(xmin) / 1.1  # plot limits
+    fuu = designer.fu(xmax) * 1.1
+    fig = plt.figure()
+    plt.xlabel('f (Hz)')
+    plt.ylabel('Magnitude (dB)')
+    for x in range(xmin, xmax+1):  # loop over bands
+
+        fl = designer.fl(x)  # lower cut off
+        fu = designer.fu(x)  # upper
+
+        fln = fl/fnyq  # lower cutoff, normalized [0, 1]
+        fun = fu/fnyq  # upper
+
+        sos = designer.createSOSFilter(x)
+        fnorm, h = sosfreqz(sos, worN=2**18, whole=False)
+        freq = fnorm*fnyq/np.pi
+
+        h_dB = 20*np.log10(np.abs(h) + np.finfo(float).eps)
+        if not designer.testStandardCompliance(x, freq, h_dB):
+            print('==============================')
+            print(designer.nominal_txt(x), ' does not comply\n')
+            compliant = False
+
+        plt.semilogx(freq, h_dB)
+
+        # Upper / lower limits
+        freqlim, ulim, llim = designer.band_limits(x)
+        plt.semilogx(freqlim, ulim)
+        plt.semilogx(freqlim, llim)
+
+        plt.ylim(-5, 1)
+        plt.xlim(fll, fuu)
+
+    print(f"Passed test : {compliant} for fs = {fs} Hz")
+    return compliant
+
+
+if __name__ == "__main__":
+    # Make list of fs to be tested
+    # Taken from https://en.wikipedia.org/wiki/Sampling_(signal_processing)
+    fs_all = [8000, 11025, 16000, 22050, 32000, 37800, 44056, 44100, 47250,
+              48000, 50000, 50400, 64000, 88200, 96000, 176400, 192000, 352800]
+    allcompliant = True
+    for fs in fs_all:
+        compliant = check_one(fs)
+        if not compliant:
+            allcompliant = False
+print(f"\n\nAll passed test : {allcompliant}")
--- a/test/test_aps.py
+++ b/test/test_aps.py
@ -8,8 +8,6 @@ Created on Mon Jan 15 19:45:33 2018
 import numpy as np
 from lasp import AvPowerSpectra, Window

-import matplotlib.pyplot as plt
-# plt.close('all')
 def test_aps1():

    nfft = 16384
--- a/test/test_cppslm.py
+++ b/test/test_cppslm.py
@ -2,34 +2,35 @@
 import numpy as np
 from lasp import cppSLM
 from lasp.filter import SPLFilterDesigner
-import matplotlib.pyplot as plt
+

 def test_cppslm1():
    """
    Generate a sine wave
    """
    fs = 48000
-    omg = 2*np.pi*1000
-    
-    slm = cppSLM.fromBiquads(fs, 2e-5, 1, 0.125, [1.,0,0,1,0,0])
-    
-    t = np.linspace(0, 10, 10*fs, endpoint=False)
+    omg = 2 * np.pi * 1000
+
+    slm = cppSLM.fromBiquads(fs, 2e-5, 1, 0.125,
+                             np.array([[1., 0, 0, 1, 0, 0]]).T)
+
+    t = np.linspace(0, 10, 10 * fs, endpoint=False)
+
+    # Input signal with an rms of 1 Pa
+    in_ = np.sin(omg * t) * np.sqrt(2)

-    # Input signal with an rms of 1 Pa    
-    in_ = np.sin(omg*t)*np.sqrt(2)
-    
    # Compute overall RMS
-    rms = np.sqrt(np.sum(in_**2)/in_.size)
+    rms = np.sqrt(np.sum(in_**2) / in_.size)
    # Compute overall level
-    level = 20*np.log10(rms/2e-5)
-    
+    level = 20 * np.log10(rms / 2e-5)
+
    # Output of SLM
    out = slm.run(in_)
-    
+
    # Output of SLM should be close to theoretical
    # level, at least for reasonable time constants
    # (Fast, Slow etc)
-    assert(np.isclose(out[-1,0], level))
+    assert (np.isclose(out[-1, 0], level))


 def test_cppslm2():
@ -37,53 +38,57 @@ def test_cppslm2():
    Generate a sine wave, now A-weighted
    """
    fs = 48000
-    omg = 2*np.pi*1000
-    
+    omg = 2 * np.pi * 1000
+
    filt = SPLFilterDesigner(fs).A_Sos_design()
-    slm = cppSLM.fromBiquads(fs, 2e-5, 0, 0.125, filt.flatten(), [1.,0,0,1,0,0])
-    
-    t = np.linspace(0, 10, 10*fs, endpoint=False)
-    
-    # Input signal with an rms of 1 Pa    
-    in_ = np.sin(omg*t) *np.sqrt(2)
-    
+    slm = cppSLM.fromBiquads(fs, 2e-5, 0, 0.125,
+                             filt.flatten(),  # Pre-filter coefs
+                             np.array([[1., 0, 0, 1, 0, 0]]).T # Bandpass coefs
+                            )
+
+    t = np.linspace(0, 10, 10 * fs, endpoint=False)
+
+    # Input signal with an rms of 1 Pa
+    in_ = np.sin(omg * t) * np.sqrt(2)
+
    # Compute overall RMS
-    rms = np.sqrt(np.sum(in_**2)/in_.size)
+    rms = np.sqrt(np.sum(in_**2) / in_.size)
    # Compute overall level
-    level = 20*np.log10(rms/2e-5)
-    
+    level = 20 * np.log10(rms / 2e-5)
+
    # Output of SLM
    out = slm.run(in_)

    # Output of SLM should be close to theoretical
    # level, at least for reasonable time constants
    # (Fast, Slow etc)
-    assert np.isclose(out[-1,0], level, atol=1e-2)
+    assert np.isclose(out[-1, 0], level, atol=1e-2)
+

 def test_cppslm3():
    fs = 48000
-    omg = 2*np.pi*1000
-    
+    omg = 2 * np.pi * 1000
+
    filt = SPLFilterDesigner(fs).A_Sos_design()
-    slm = cppSLM.fromBiquads(fs, 2e-5, 0, 0.125, filt.flatten(), [1.,0,0,1,0,0])
-    t = np.linspace(0, 10, 10*fs, endpoint=False)
-    
-    in_ = 10*np.sin(omg*t) * np.sqrt(2)+np.random.randn()
+    slm = cppSLM.fromBiquads(fs, 2e-5, 0, 0.125,
+                             filt.flatten(), 
+                             np.array([[1., 0, 0, 1, 0, 0]]).T)
+    t = np.linspace(0, 10, 10 * fs, endpoint=False)
+
+    in_ = 10 * np.sin(omg * t) * np.sqrt(2) + np.random.randn()
    # Compute overall RMS
-    rms = np.sqrt(np.sum(in_**2)/in_.size)
+    rms = np.sqrt(np.sum(in_**2) / in_.size)
    # Compute overall level
-    level = 20*np.log10(rms/2e-5)
-    
-    
+    level = 20 * np.log10(rms / 2e-5)
+
    # Output of SLM
    out = slm.run(in_)
-    
-    Lpeak = 20*np.log10(np.max(np.abs(in_)/2e-5))
+
+    Lpeak = 20 * np.log10(np.max(np.abs(in_) / 2e-5))
    Lpeak
    slm.Lpeak()
-    assert np.isclose(out[-1,0], slm.Leq()[0][0], atol=1e-2)
-    assert np.isclose(Lpeak, slm.Lpeak()[0][0], atol=2e0)
-
+    assert np.isclose(out[-1, 0], slm.Leq()[0], atol=1e-2)
+    assert np.isclose(Lpeak, slm.Lpeak()[0], atol=2e0)


 if __name__ == '__main__':
--- a/test/test_ps.py
+++ b/test/test_ps.py
@ -5,8 +5,6 @@ Testing code for power spectra
 """
 import numpy as np
 from lasp import PowerSpectra, Window
-# import matplotlib.pyplot as plt
-# plt.close('all')

 def test_ps():
    """
--- a/test/test_slm.py
+++ b/test/test_slm.py
@ -1,37 +0,0 @@
-#!/usr/bin/python3
-import numpy as np
-from lasp import SLM
-
-
-
-nframes = 0
-samplerate = 48000
-omg = 2*np.pi*1000
-
-
-
-# def mycallback(input_, nframes, streamtime):
-#     t = np.linspace(streamtime, streamtime + nframes/samplerate,
-#             nframes)[np.newaxis,:]
-#     outp = 0.1*np.sin(omg*t)
-#     return outp, 0
-
-# if __name__ == '__main__':
-#     pa = RtAudio()
-#     count = pa.getDeviceCount()
-#     # dev = pa.getDeviceInfo(0)
-#     for i in range(count):
-#         dev = pa.getDeviceInfo(i)
-#         print(dev)
-   
-#     outputparams = {'deviceid': 0, 'nchannels': 1, 'firstchannel': 0}
-#     pa.openStream(outputparams, None , Format_FLOAT64,samplerate, 512, mycallback)
-#     pa.startStream()
-
-#     input()
-
-#     pa.stopStream()
-#     pa.closeStream()
-
-
-