pyqtgraph/pyqtgraph/__init__.py

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# -*- coding: utf-8 -*-
"""
PyQtGraph - Scientific Graphics and GUI Library for Python
www.pyqtgraph.org
"""
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__version__ = '0.12.1'
### import all the goodies and add some helper functions for easy CLI use
## 'Qt' is a local module; it is intended mainly to cover up the differences
## between PyQt4 and PySide.
from .Qt import QtGui, mkQApp
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## not really safe--If we accidentally create another QApplication, the process hangs (and it is very difficult to trace the cause)
#if QtGui.QApplication.instance() is None:
#app = QtGui.QApplication([])
import numpy ## pyqtgraph requires numpy
## (import here to avoid massive error dump later on if numpy is not available)
import os, sys
## check python version
## Allow anything >= 2.7
if sys.version_info[0] < 2 or (sys.version_info[0] == 2 and sys.version_info[1] < 6):
raise Exception("Pyqtgraph requires Python version 2.6 or greater (this is %d.%d)" % (sys.version_info[0], sys.version_info[1]))
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## helpers for 2/3 compatibility
from . import python2_3
## in general openGL is poorly supported with Qt+GraphicsView.
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## we only enable it where the performance benefit is critical.
## Note this only applies to 2D graphics; 3D graphics always use OpenGL.
if 'linux' in sys.platform: ## linux has numerous bugs in opengl implementation
useOpenGL = False
elif 'darwin' in sys.platform: ## openGL can have a major impact on mac, but also has serious bugs
useOpenGL = False
else:
useOpenGL = False ## on windows there's a more even performance / bugginess tradeoff.
CONFIG_OPTIONS = {
'useOpenGL': useOpenGL, ## by default, this is platform-dependent (see widgets/GraphicsView). Set to True or False to explicitly enable/disable opengl.
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'leftButtonPan': True, ## if false, left button drags a rubber band for zooming in viewbox
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# foreground/background take any arguments to the 'mkColor' in /pyqtgraph/functions.py
'foreground': 'd', ## default foreground color for axes, labels, etc.
'background': 'k', ## default background for GraphicsWidget
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'antialias': False,
'editorCommand': None, ## command used to invoke code editor from ConsoleWidgets
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'exitCleanup': True, ## Attempt to work around some exit crash bugs in PyQt and PySide
'enableExperimental': False, ## Enable experimental features (the curious can search for this key in the code)
'crashWarning': False, # If True, print warnings about situations that may result in a crash
'mouseRateLimit': 100, # For ignoring frequent mouse events, max number of mouse move events per second, if <= 0, then it is switched off
'imageAxisOrder': 'col-major', # For 'row-major', image data is expected in the standard (row, col) order.
# For 'col-major', image data is expected in reversed (col, row) order.
# The default is 'col-major' for backward compatibility, but this may
# change in the future.
Performance enhancement: use CUDA in ImageItem (#1466) * Add CLI args to video speed test for easier / automated benchmarking * use a buffer-qimage so we can avoid allocing so much this should improve performance under windows * playing with numba * oh, mins/maxes in the other order * maybe put the cupy in here and see what happens * pre-alloc for gpu and cpu * handle possibility of not having cupy * no numba in this branch * organize imports * name them after their use, not their expected device * cupy.take does not support clip mode, so do it explicitly * add CUDA option to the VideoSpeedTest * rename private attr xp to _xp * handle resizes at the last moment * cupy is less accepting of lists as args * or somehow range isn't allowed? what histogram is this? * construct the array with python objects * get the python value right away * put LUT into cupy if needed * docstring about cuda toolkit version * better handling and display of missing cuda lib * lint * import need * handle switching between cupy and numpy in a single ImageItem * only use xp when necessary we can now depend on numpy >= 1.17, which means __array_function__-implementing cupy can seamlessly pass into numpy functions. the remaining uses of xp are for our functions which need to allocate new data structures, an operation that has to be substrate-specific. remove empty_cupy; just check if the import succeeded, instead. * use an option to control use of cupy * convert cupy.ceil array to int for easier mathing * RawImageWidget gets to use the getCupy function now, too * raise error to calm linters; rename for clarity * Add Generated Template Files * document things better * cruft removal * warnings to communicate when cupy is expected but somehow broken * playing with settings to suss out timeout * playing with more stuff to suss out timeout * replace with empty list * skip test_ExampleApp on linux+pyside2 only Co-authored-by: Luke Campagnola <luke.campagnola@gmail.com> Co-authored-by: Ogi Moore <ognyan.moore@gmail.com>
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'useCupy': False, # When True, attempt to use cupy ( currently only with ImageItem and related functions )
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}
def setConfigOption(opt, value):
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if opt not in CONFIG_OPTIONS:
raise KeyError('Unknown configuration option "%s"' % opt)
if opt == 'imageAxisOrder' and value not in ('row-major', 'col-major'):
raise ValueError('imageAxisOrder must be either "row-major" or "col-major"')
CONFIG_OPTIONS[opt] = value
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def setConfigOptions(**opts):
"""Set global configuration options.
Each keyword argument sets one global option.
"""
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for k,v in opts.items():
setConfigOption(k, v)
def getConfigOption(opt):
"""Return the value of a single global configuration option.
"""
return CONFIG_OPTIONS[opt]
def systemInfo():
print("sys.platform: %s" % sys.platform)
print("sys.version: %s" % sys.version)
from .Qt import VERSION_INFO
print("qt bindings: %s" % VERSION_INFO)
global __version__
rev = None
if __version__ is None: ## this code was probably checked out from bzr; look up the last-revision file
lastRevFile = os.path.join(os.path.dirname(__file__), '..', '.bzr', 'branch', 'last-revision')
if os.path.exists(lastRevFile):
with open(lastRevFile, 'r') as fd:
rev = fd.read().strip()
print("pyqtgraph: %s; %s" % (__version__, rev))
print("config:")
import pprint
pprint.pprint(CONFIG_OPTIONS)
## Rename orphaned .pyc files. This is *probably* safe :)
## We only do this if __version__ is None, indicating the code was probably pulled
## from the repository.
def renamePyc(startDir):
### Used to rename orphaned .pyc files
### When a python file changes its location in the repository, usually the .pyc file
### is left behind, possibly causing mysterious and difficult to track bugs.
### Note that this is no longer necessary for python 3.2; from PEP 3147:
### "If the py source file is missing, the pyc file inside __pycache__ will be ignored.
### This eliminates the problem of accidental stale pyc file imports."
printed = False
startDir = os.path.abspath(startDir)
for path, dirs, files in os.walk(startDir):
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if '__pycache__' in path:
continue
for f in files:
fileName = os.path.join(path, f)
base, ext = os.path.splitext(fileName)
py = base + ".py"
if ext == '.pyc' and not os.path.isfile(py):
if not printed:
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print("NOTE: Renaming orphaned .pyc files:")
printed = True
n = 1
while True:
name2 = fileName + ".renamed%d" % n
if not os.path.exists(name2):
break
n += 1
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print(" " + fileName + " ==>")
print(" " + name2)
os.rename(fileName, name2)
path = os.path.split(__file__)[0]
if __version__ is None and not hasattr(sys, 'frozen') and sys.version_info[0] == 2: ## If we are frozen, there's a good chance we don't have the original .py files anymore.
renamePyc(path)
## Import almost everything to make it available from a single namespace
## don't import the more complex systems--canvas, parametertree, flowchart, dockarea
## these must be imported separately.
#from . import frozenSupport
#def importModules(path, globals, locals, excludes=()):
#"""Import all modules residing within *path*, return a dict of name: module pairs.
#Note that *path* MUST be relative to the module doing the import.
#"""
#d = os.path.join(os.path.split(globals['__file__'])[0], path)
#files = set()
#for f in frozenSupport.listdir(d):
#if frozenSupport.isdir(os.path.join(d, f)) and f not in ['__pycache__', 'tests']:
#files.add(f)
#elif f[-3:] == '.py' and f != '__init__.py':
#files.add(f[:-3])
#elif f[-4:] == '.pyc' and f != '__init__.pyc':
#files.add(f[:-4])
#mods = {}
#path = path.replace(os.sep, '.')
#for modName in files:
#if modName in excludes:
#continue
#try:
#if len(path) > 0:
#modName = path + '.' + modName
#print( "from .%s import * " % modName)
#mod = __import__(modName, globals, locals, ['*'], 1)
#mods[modName] = mod
#except:
#import traceback
#traceback.print_stack()
#sys.excepthook(*sys.exc_info())
#print("[Error importing module: %s]" % modName)
#return mods
#def importAll(path, globals, locals, excludes=()):
#"""Given a list of modules, import all names from each module into the global namespace."""
#mods = importModules(path, globals, locals, excludes)
#for mod in mods.values():
#if hasattr(mod, '__all__'):
#names = mod.__all__
#else:
#names = [n for n in dir(mod) if n[0] != '_']
#for k in names:
#if hasattr(mod, k):
#globals[k] = getattr(mod, k)
# Dynamic imports are disabled. This causes too many problems.
#importAll('graphicsItems', globals(), locals())
#importAll('widgets', globals(), locals(),
#excludes=['MatplotlibWidget', 'RawImageWidget', 'RemoteGraphicsView'])
from .graphicsItems.VTickGroup import *
from .graphicsItems.GraphicsWidget import *
from .graphicsItems.ScaleBar import *
from .graphicsItems.PlotDataItem import *
from .graphicsItems.GraphItem import *
from .graphicsItems.TextItem import *
from .graphicsItems.GraphicsLayout import *
from .graphicsItems.UIGraphicsItem import *
from .graphicsItems.GraphicsObject import *
from .graphicsItems.PlotItem import *
from .graphicsItems.ROI import *
from .graphicsItems.InfiniteLine import *
from .graphicsItems.HistogramLUTItem import *
from .graphicsItems.GridItem import *
from .graphicsItems.GradientLegend import *
from .graphicsItems.GraphicsItem import *
from .graphicsItems.BarGraphItem import *
from .graphicsItems.ViewBox import *
from .graphicsItems.ArrowItem import *
from .graphicsItems.ImageItem import *
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from .graphicsItems.PColorMeshItem import *
from .graphicsItems.AxisItem import *
Date axis item (#1154) * Add DateAxisItem * Change style to camelCase * Fix missing first tick for negative timestamps * Add ms precision, auto skipping Auto skipping allows a zoom level to skip ticks automatically if the maximum number of ticks/pt is exceeded * fixes suggested by @goetzc * workaround for negative argument to utcfromtimestamp on windows * attachToPlotItem method * default date axis orientation * Use new DateAxisItem in Plot Customization example * attachToPlotItem bugfix * examples of DateAxisItem * modified description of customPlot example * added descriptions to the new examples, reformatted their code, included the first one into utils.py * typo * Refactored code for setting axis items into new function Replaces "DateAxisItem.attachToPlotItem" * Fix string comparison with == * Doc: Slightly more text for DateAxisItem, small improvement for PlotItem * Make PlotWidget.setAxisItems official * Fix typo in docstring * renamed an example * merge bug fix * Revert "merge bug fix" This reverts commit 876b5a7cdb50cd824b4a5218427081b3ce5c2fe4. * Real bug fix * support for dates upto -1e13..1e13 * Automatically limit DateAxisItem to a range from -1e12 to 1e12 years Very large years (|y|>1e13) cause infinite loop, and since nobody needs time 100 times larger than the age of the universe anyways, this constrains it to 1e12. Following suggestion by @axil: https://github.com/pyqtgraph/pyqtgraph/pull/1154#issuecomment-612662168 * Also catch ValueErrors occuring on Linux before OverfloeErrors While zooming out, before hitting OverflowErrors, utctimestamp produces ValueErrors (at least on my Linux machine), so they are also catched. * Fix: Timestamp 0 corresponds to year 1970 For large years, x axis labels jump by 1970 years if it is not accounted for timestamp 0 to be equal to year 1970. * Fix: When zooming into extreme dates, OSError occurs This commit catches the OSError like the other observed errors * Disable stepping below years for dates outside *_REGULAR_TIMESTAMP 2 reasons: First: At least on my Linux machine, zooming into those dates creates infinite loops. Second: Nobody needs sub-year-precision for those extreme years anyways. * Adapt zoom level sizes based on current font size and screen resolution This is somewhat experimental. With this commit, no longer 60 px are assumed as width for all zoom levels, but the current font and display resolution are considered to calculate the width of ticks in each zoom level. See the new function `updateZoomLevels` for details. Before calling this function, overridden functions `paint` and `generateDrawSpecs` provide information over the current display and font via `self.fontScaleFactor` and `self.fontMetrics`. * Meaningful error meassage when adding axis to multiple PlotItems As @axil noted in the DateAxisItem PR, currently users get a segmentation fault when one tries to add an axis to multiple PlotItems. This commit adds a meaningful RuntimeError message for that case. * setZoomLevelForDensity: Refactoring and calculating optimal spacing on the fly * DateTimeAxis Fix: 1970 shows when zooming far out * Refactoring: Make zoomLevels a customizable dict again * updated the dateaxisitem example * Fix: Get screen resolution in a way that also works for Qt 4 This is both a simplification in code and an improvement in backwards compatibility with Qt 4. * DateAxisItem Fix: Also resolve time below 0.5 seconds * unix line endings in examples * DateTimeAxis Fix: For years < 1 and > 9999, stepping broke Stepping was off by 1970 years for years < 1 and > 9999, resulting in a gap in ticks visible when zooming out. Fixed by subtracting the usual 1970 years. * DateTimeAxis Fix: Zooming out too far causes infinite loop Fixed by setting default limits to +/- 1e10 years. Should still be enough. * improved second dateaxisitem example * 1..9999 years limit * DateTimeAxis: Use OrderedDict to stay compatible with Python < 3-6 * DateAxisItem: Use font height to determine spacing for vertical axes * window title * added dateaxisitem.rst * updated index.rst Co-authored-by: Lukas Heiniger <lukas.heiniger@sed.ethz.ch> Co-authored-by: Lev Maximov <lev.maximov@gmail.com> Co-authored-by: 2xB <2xB@users.noreply.github.com>
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from .graphicsItems.DateAxisItem import *
from .graphicsItems.LabelItem import *
from .graphicsItems.CurvePoint import *
from .graphicsItems.GraphicsWidgetAnchor import *
from .graphicsItems.PlotCurveItem import *
from .graphicsItems.ButtonItem import *
from .graphicsItems.GradientEditorItem import *
from .graphicsItems.ColorBarItem import *
from .graphicsItems.MultiPlotItem import *
from .graphicsItems.ErrorBarItem import *
from .graphicsItems.IsocurveItem import *
from .graphicsItems.LinearRegionItem import *
from .graphicsItems.FillBetweenItem import *
from .graphicsItems.LegendItem import *
from .graphicsItems.ScatterPlotItem import *
from .graphicsItems.ItemGroup import *
from .graphicsItems.TargetItem import *
from .widgets.MultiPlotWidget import *
from .widgets.ScatterPlotWidget import *
from .widgets.ColorMapWidget import *
from .widgets.FileDialog import *
from .widgets.ValueLabel import *
from .widgets.HistogramLUTWidget import *
from .widgets.CheckTable import *
from .widgets.BusyCursor import *
from .widgets.PlotWidget import *
from .widgets.ComboBox import *
from .widgets.GradientWidget import *
from .widgets.DataFilterWidget import *
from .widgets.SpinBox import *
from .widgets.JoystickButton import *
from .widgets.GraphicsLayoutWidget import *
from .widgets.TreeWidget import *
from .widgets.PathButton import *
from .widgets.VerticalLabel import *
from .widgets.FeedbackButton import *
from .widgets.ColorButton import *
from .widgets.DataTreeWidget import *
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from .widgets.DiffTreeWidget import *
from .widgets.GraphicsView import *
from .widgets.LayoutWidget import *
from .widgets.TableWidget import *
from .widgets.ProgressDialog import *
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from .widgets.GroupBox import GroupBox
from .widgets.RemoteGraphicsView import RemoteGraphicsView
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from .imageview import *
from .WidgetGroup import *
from .Point import Point
from .Vector import Vector
from .SRTTransform import SRTTransform
from .Transform3D import Transform3D
from .SRTTransform3D import SRTTransform3D
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from .functions import *
from .graphicsWindows import *
from .SignalProxy import *
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from .colormap import *
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from .ptime import time
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from .Qt import isQObjectAlive
from .ThreadsafeTimer import *
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##############################################################
## PyQt and PySide both are prone to crashing on exit.
## There are two general approaches to dealing with this:
## 1. Install atexit handlers that assist in tearing down to avoid crashes.
## This helps, but is never perfect.
## 2. Terminate the process before python starts tearing down
## This is potentially dangerous
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## Attempts to work around exit crashes:
import atexit
_cleanupCalled = False
def cleanup():
global _cleanupCalled
if _cleanupCalled:
return
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if not getConfigOption('exitCleanup'):
return
ViewBox.quit() ## tell ViewBox that it doesn't need to deregister views anymore.
## Workaround for Qt exit crash:
## ALL QGraphicsItems must have a scene before they are deleted.
## This is potentially very expensive, but preferred over crashing.
## Note: this appears to be fixed in PySide as of 2012.12, but it should be left in for a while longer..
app = QtGui.QApplication.instance()
if app is None or not isinstance(app, QtGui.QApplication):
# app was never constructed is already deleted or is an
# QCoreApplication/QGuiApplication and not a full QApplication
return
import gc
s = QtGui.QGraphicsScene()
for o in gc.get_objects():
try:
if isinstance(o, QtGui.QGraphicsItem) and isQObjectAlive(o) and o.scene() is None:
if getConfigOption('crashWarning'):
sys.stderr.write('Error: graphics item without scene. '
'Make sure ViewBox.close() and GraphicsView.close() '
'are properly called before app shutdown (%s)\n' % (o,))
s.addItem(o)
except (RuntimeError, ReferenceError): ## occurs if a python wrapper no longer has its underlying C++ object
continue
_cleanupCalled = True
atexit.register(cleanup)
# Call cleanup when QApplication quits. This is necessary because sometimes
# the QApplication will quit before the atexit callbacks are invoked.
# Note: cannot connect this function until QApplication has been created, so
# instead we have GraphicsView.__init__ call this for us.
_cleanupConnected = False
def _connectCleanup():
global _cleanupConnected
if _cleanupConnected:
return
QtGui.QApplication.instance().aboutToQuit.connect(cleanup)
_cleanupConnected = True
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## Optional function for exiting immediately (with some manual teardown)
def exit():
"""
Causes python to exit without garbage-collecting any objects, and thus avoids
calling object destructor methods. This is a sledgehammer workaround for
a variety of bugs in PyQt and Pyside that cause crashes on exit.
This function does the following in an attempt to 'safely' terminate
the process:
* Invoke atexit callbacks
* Close all open file handles
* os._exit()
Note: there is some potential for causing damage with this function if you
are using objects that _require_ their destructors to be called (for example,
to properly terminate log files, disconnect from devices, etc). Situations
like this are probably quite rare, but use at your own risk.
"""
## first disable our own cleanup function; won't be needing it.
setConfigOptions(exitCleanup=False)
## invoke atexit callbacks
atexit._run_exitfuncs()
## close file handles
if sys.platform == 'darwin':
for fd in range(3, 4096):
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if fd in [7]: # trying to close 7 produces an illegal instruction on the Mac.
continue
try:
os.close(fd)
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except OSError:
pass
else:
os.closerange(3, 4096) ## just guessing on the maximum descriptor count..
os._exit(0)
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## Convenience functions for command-line use
plots = []
images = []
QAPP = None
def plot(*args, **kargs):
"""
Create and return a :class:`PlotWidget <pyqtgraph.PlotWinPlotWidgetdow>`
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Accepts a *title* argument to set the title of the window.
All other arguments are used to plot data. (see :func:`PlotItem.plot() <pyqtgraph.PlotItem.plot>`)
"""
mkQApp()
pwArgList = ['title', 'labels', 'name', 'left', 'right', 'top', 'bottom', 'background']
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pwArgs = {}
dataArgs = {}
for k in kargs:
if k in pwArgList:
pwArgs[k] = kargs[k]
else:
dataArgs[k] = kargs[k]
windowTitle = pwArgs.pop("title", "PlotWidget")
w = PlotWidget(**pwArgs)
w.setWindowTitle(windowTitle)
if len(args) > 0 or len(dataArgs) > 0:
w.plot(*args, **dataArgs)
plots.append(w)
w.show()
return w
Patch/window handling (#468) * Do not wrap PlotView/ImageView There is no need to wrap PlotView/ImageView into QMainWindow, since only purpose of the QMainWindow is some default menu toolbar & menu handling, that is not used by PyQtGraph anyway. Moreover, every parent-less Qt widget can become window, so this change just use PlotView/ImageView as windows, removing extra complexity, eg. method forwarding, self.win property. Another benefit of this change, it that these windows get initial dimensions and titles as they were designed in .ui file. * Properly cleanup on ImageView.close() We should not close explicitly child widgets or clear scene, otherwise Qt will deallocate children views, and cause "wrapped C/C++ object of type ImageItem has been deleted" error next time we call close() and/or some other methods. All children, including self.ui.roiPlot, self.ui.graphicsView will be closed together with its parent, so there is no need to close them explicitly. So the purpose of close it to reclaim the memory, but not to make the existing ImageView object dysfunctional. * Remove references to plot & image windows after close PyQtGraph images and plots module list variables are currently holding references to all plots and image windows returned directly from main module. This does not seem to be documented however, and causes the Qt windows to be not released from memory, even if user releases all own references. This change removes the references from images/plots list once window is closed, so when there is no other reference, window and all related memory is reclaimed. * Change all UI forms title from Form to PyQtGraph Co-authored-by: Ogi Moore <ognyan.moore@gmail.com>
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def image(*args, **kargs):
"""
Create and return an :class:`ImageView <pyqtgraph.ImageView>`
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Will show 2D or 3D image data.
Accepts a *title* argument to set the title of the window.
All other arguments are used to show data. (see :func:`ImageView.setImage() <pyqtgraph.ImageView.setImage>`)
"""
mkQApp()
w = ImageView()
windowTitle = kargs.pop("title", "ImageView")
w.setWindowTitle(windowTitle)
w.setImage(*args, **kargs)
images.append(w)
w.show()
return w
show = image ## for backward compatibility
Patch/window handling (#468) * Do not wrap PlotView/ImageView There is no need to wrap PlotView/ImageView into QMainWindow, since only purpose of the QMainWindow is some default menu toolbar & menu handling, that is not used by PyQtGraph anyway. Moreover, every parent-less Qt widget can become window, so this change just use PlotView/ImageView as windows, removing extra complexity, eg. method forwarding, self.win property. Another benefit of this change, it that these windows get initial dimensions and titles as they were designed in .ui file. * Properly cleanup on ImageView.close() We should not close explicitly child widgets or clear scene, otherwise Qt will deallocate children views, and cause "wrapped C/C++ object of type ImageItem has been deleted" error next time we call close() and/or some other methods. All children, including self.ui.roiPlot, self.ui.graphicsView will be closed together with its parent, so there is no need to close them explicitly. So the purpose of close it to reclaim the memory, but not to make the existing ImageView object dysfunctional. * Remove references to plot & image windows after close PyQtGraph images and plots module list variables are currently holding references to all plots and image windows returned directly from main module. This does not seem to be documented however, and causes the Qt windows to be not released from memory, even if user releases all own references. This change removes the references from images/plots list once window is closed, so when there is no other reference, window and all related memory is reclaimed. * Change all UI forms title from Form to PyQtGraph Co-authored-by: Ogi Moore <ognyan.moore@gmail.com>
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def dbg(*args, **kwds):
"""
Create a console window and begin watching for exceptions.
All arguments are passed to :func:`ConsoleWidget.__init__() <pyqtgraph.console.ConsoleWidget.__init__>`.
"""
mkQApp()
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from . import console
c = console.ConsoleWidget(*args, **kwds)
c.catchAllExceptions()
c.show()
global consoles
try:
consoles.append(c)
except NameError:
consoles = [c]
return c
def stack(*args, **kwds):
"""
Create a console window and show the current stack trace.
All arguments are passed to :func:`ConsoleWidget.__init__() <pyqtgraph.console.ConsoleWidget.__init__>`.
"""
mkQApp()
from . import console
c = console.ConsoleWidget(*args, **kwds)
c.setStack()
c.show()
global consoles
try:
consoles.append(c)
except NameError:
consoles = [c]
return c