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We don't want external change to automatically marked the buffer dirty.
https://www.mail-archive.com/lyx-devel@lists.lyx.org/msg203995.html
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@ -5293,7 +5293,6 @@ void Buffer::Impl::fileExternallyModified(bool const exists)
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"checksum unchanged: " << filename);
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return;
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}
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lyx_clean = bak_clean = false;
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// If the file has been deleted, only mark the file as dirty since it is
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// pointless to prompt for reloading. If later a file is moved into this
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// location, then the externally modified warning will appear then.
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