Various places in the library attempt to check if scalars are finite
via numpy methods, which are intended to be used on numpy arrays. Using
the math module equivalent functions on scalars is significantly faster.
In a few places, I also use numpy methods explicitly (np.all vs. all)
Many places in the library were doing radian to degree conversion
via the manual calculation. Doing timeit benchmarks on my system, I
am able to get a 4x speedup by using math.degrees or math.radians
instead
Significant performance issues have been identified with np.clip
and thus clip_array was created to speed up the operation. In addition
clip_scalar was created to clip a scalar value between two other values
this commit replaces many uses of np.clip from operating on scalars to
using clip_scalar instead
Using numpy methods that are intended for vectorized operations is
substantially slower than using the math module, so when feasible the
math module methods should be used.
When running on macOS Big Sur, pyopenGL is unable to find the bindings
Previously this was assumed that it would be fixed in later versions
of Python 3.8, but that has not happened.
* update to working
* cupy tests, too
* doubling up and down
* add more realism to the benchmarks
* name to reflect scale
* use different numbers to mean different numbers
(that sure does sound tautological)
* more sensible: order, error
* thorough check of lots of makeARGB arg combos
* docstring for tool usage
* no print needed
* better error messages
* test makeARGB using cupy, too
* skip without cupy available
* switch from conda to venv
* skip cupy runs when not available
* use endian-proof makeARGB shim in tests
* generate the asv conf to suit the system
* document running asv
* comments for future matrix goals
* put all makeARGB tests together; name for clarity
* subprocess.check_output is standard for all supported pythons
* better handle lack of git version
* use makeARGB shim
* small fixes and improvements
* Fix the `clickable` property of `PlotDataItem`.
Currently if you attempt to set the `clickable` property of a PlotDataItem,
this property is silently ignored. The expected behavior is to set the
`clickable` property of the underlying PlotCurveItem.
* Use setCurvesClickable and curvesClickable instead
* curve is singular
PyQt6 can serialize / deserialize enums and flags w/o us manually
casting them to int.
In PyQt6 6.0, it was okay to pass the already deserialized flag
back to the class constructor.
In PyQt6 6.1, the flags MouseButtons and KeyboardModifiers have
been renamed to MouseButton and KeyboardModifier respectively.
skipping the reconstruction allows it to work on both PyQt6 6.0 and 6.1.
note that this was already done in deserialize_mouse_event()
the "offset" argument passed into rescaleData() is typically an element
of an ndarray, i.e. it comes from the lower bound value of the "levels"
ndarray. as such, arithmetic operations on it can overflow.
this triggers a runtime warning in the test suite.
the workaround is to convert it to a Python (integer) scalar.
* ROI.py, getArrayRegion: Fix return mapped coordinates
The *getArrayRegion* method is defined as returning a tuple of the points
in the selected region and the mapped coordinates if the
*returnMappedCoords* keyword argument is set to True in the parent class
*ROI*.
In the *EllipseROI* class, *getArrayRegion* was overriden, however it
ignores the *returnMappedCoords* keyword argument, leading to unintended
bugs because of the change in interface between the parent class and
the subclass.
This patch fixes the above bug.
If *returnMappedCoords* is set to False, then only *arr* containing the
array region is returned. If *returnMappedCoords* is set to True, a
tuple of the array region and the mapped coordinates is returned.
NB: At the time of this commit, the same bug is present in several classes
extending *ROI*. This commit only fixes the issue for the *EllipseROI* class.
* ROI.py, PolyLineROI.getArrayRegion: Fix return mapped coordinats
The *getArrayRegion* method is defined as returning a tuple of the
points in the selected region and the mapped coordinates if the
*returnMappedCoords* keyword argument is set to True in the parent class
*ROI*.
In the *PolyLineROI* class, *getArrayRegion* was overriden, however it
ignores the *returnMappedCoords* keyword argument, leading to unintended
bugs because of the change in interface between the parent class and the
subclass.
This patch fixes the above bug. If *returnMappedCoords* is set to
False, then only *arr* containing the array region is returned. If
*returnMappedCoords* is set to True, a tuple of the array region and the
mapped coordinates is returned.
* remove merge conflict cruft
* lint
Co-authored-by: Malik Olivier Boussejra <malik@boussejra.com>
* implement rescaleData_blocked
clip limits should be int if data is int
* add test for rescaleData_blocked
* dispatch to different versions depending on numpy or cupy
* make rescaleData() the only entry-point
* Initial implementation of ColorBarItem
* initial commit
* fixed missing indent
* docstring extension and corrections
* Converted example to match others / run as part of tests
* load local color maps instead of importing from colorcet
* clean up window creation code
* horizontal color bar and clean-up
* switched to mkQApp initialization
* cleaned up some comments
