Commit Graph

2690 Commits

Author SHA1 Message Date
pijyoi
4d6a8e4998
add usage of numba (for rescale) (#1695)
* implement rescale using numba

* workaround to pass test_makeARGB.py

* key on (input, output) manually

* remove minimum version check

* signature needs to be a list of signatures

numba considers it a mistake for single-item non-list but works around
it internally

* add numba test to test_makeARGB.py

* add numba as dependency in CI

* handle properly the case where useNumba was already True

* restore useCupy setting after test

* filter numba nan warning

* don't make changes to test_cupy_makeARGB_...
2021-04-28 22:29:09 -07:00
Nils Nemitz
a7bc2b9a63
clean-up of PlotDataItem downsample methods (#1725)
* clean-up of PlotDataItem downsample methods

* high end of range at low end, not zero

Co-authored-by: Ogi Moore <ognyan.moore@gmail.com>
2021-04-28 22:07:24 -07:00
Martin Chase
4ee1fe4388
fix bug when plotting boolean arrays (#1748)
* test and fix for plotting boolean arrays

* smaller is faster

* oh, that bool went away

* tests should keep up with optimizations
2021-04-28 21:35:27 -07:00
Ogi Moore
a534132c62
Various performance improvements to pg.Point (#1741)
This change makes use of QPointF methods which perform faster than the python
equivalent methods.  Furthermore, some tests are added.

* Set __slots__ to empty tuple for pg.Point
* Make Point.angle() behave as Vector.angle()
2021-04-28 21:29:47 -07:00
Ogi Moore
fe66f3fd12
Merge pull request #1746 from pijyoi/fix_cprint_remote
fix: cprint of remote output needs decode()
2021-04-28 20:46:24 -07:00
KIU Shueng Chuan
306e9c2498 fix: cprint of remote output needs decode() 2021-04-28 16:38:15 +08:00
Ogi Moore
2cbc86bee1
Merge pull request #1743 from j9ac9k/cleanup-some-static-code-checks
Cleanup some static code checks
2021-04-25 22:01:06 -07:00
Ogi Moore
2d8d1d6d32 Add tmp_module fixture for test_reload 2021-04-25 21:36:42 -07:00
Ogi Moore
7c48233bfa Remove unreachable code 2021-04-25 21:36:23 -07:00
Ogi Moore
38dccf8642 Fix indentation bug with flowchart 2021-04-25 20:10:54 -07:00
Ogi Moore
00a0ddb0d4 Do not import value of mutable attribute
This was brought to the attention via the stack type checker, Easy fix so it is being
implemented.
2021-04-25 20:08:47 -07:00
Ogi Moore
4d388ee633 Use open context-manager instead of file.open()
Static code checker identified multiple places where a file is opened
but is not necessarily closed.  This commit addressed that with the
exception of RemoteGraphicsView.py
2021-04-25 17:05:05 -07:00
Ogi Moore
cf95964678
Merge pull request #1738 from pijyoi/fix_font
use Format_RGB32 when using QImage as paint device
2021-04-24 09:43:42 -07:00
Ogi Moore
d9a3774f6c
Merge pull request #1739 from pijyoi/manual_form
Export dialog: ParameterTree needs 2 columns
2021-04-24 09:41:40 -07:00
Ogi Moore
6a708dc203
Merge pull request #1724 from j9ac9k/use-math-module-for-single-values
Use math module methods for scalars
2021-04-23 23:10:17 -07:00
Ogi Moore
03ea368454 Clean up Errors for CodeQL analyzer
CodeQL identified some errors and warnings, which this commit cleans up.
2021-04-23 22:44:29 -07:00
Ogi Moore
329423f525 Use QTransform.rotateRadians when appropriate
In a few places in the library, we are doing the conversion from radians
to degrees just so we can call QTransform.rotate(), but there is a
QTransform.rotateRadians() method which would be more suitable, thus
making it so we do not have to handle the conversions ourselves
2021-04-23 22:43:57 -07:00
Ogi Moore
e1415cb3a8 Use np.pi or math.pi instead of just pi 2021-04-23 22:43:57 -07:00
Ogi Moore
6a386e723b Fix overflow warning in QColor by using np.isfinite 2021-04-23 22:43:57 -07:00
Ogi Moore
3ea92736b8 Do not use list comprehensions with any or all
python any and all are able to break early the moment they come across a
member of the iterable that meets the condition; but having a list
comprehension nested within breaks that ability to exit early, as the
list comprehension has to finish being constructed first before it can
be evaluated
2021-04-23 22:43:57 -07:00
Ogi Moore
314121192a Use math module for isfinite or isnan for scalars
Various places in the library attempt to check if scalars are finite
via numpy methods, which are intended to be used on numpy arrays.  Using
the math module equivalent functions on scalars is significantly faster.

In a few places, I also use numpy methods explicitly (np.all vs. all)
2021-04-23 22:43:57 -07:00
Ogi Moore
b0769f4be9 Use math.radians and math.degrees
Many places in the library were doing radian to degree conversion
via the manual calculation.  Doing timeit benchmarks on my system, I
am able to get a 4x speedup by using math.degrees or math.radians
instead
2021-04-23 22:43:51 -07:00
Ogi Moore
1138c67d45 Use math module trig functions for scalars
This commit replaces the use of np.sin/np.cos/np.tan uses throughout
the library with math.sin/math.cos/math.tan for scalar values
2021-04-23 22:42:46 -07:00
KIU Shueng Chuan
e3372fddc5 specify that ParameterTree needs 2 columns in .ui 2021-04-24 11:21:12 +08:00
Ogi Moore
c4a1cf11a1 Use clip_array or clip_scalar instead of np.clip
Significant performance issues have been identified with np.clip
and thus clip_array was created to speed up the operation.  In addition
clip_scalar was created to clip a scalar value between two other values
this commit replaces many uses of np.clip from operating on scalars to
using clip_scalar instead
2021-04-23 11:53:00 -07:00
Ogi Moore
85c726e49a Replace uses of np.log on scalers with math.log 2021-04-23 11:53:00 -07:00
Ogi Moore
b01e0e0895 Remove unused function and change line calc
Using @pijyoi's suggestion regarding line calculation broadcasting
2021-04-23 11:53:00 -07:00
Ogi Moore
f60fa3b534 Use clip_array instead of np.clip in GLVolumeItem 2021-04-23 11:53:00 -07:00
Ogi Moore
f8cefa6284 Use hypot method to avoid over/underflow errors
Use hypot instead of manual calculation
2021-04-23 11:53:00 -07:00
Ogi Moore
b0a3849960 Use math module methods for singular values
Using numpy methods that are intended for vectorized operations is
substantially slower than using the math module, so when feasible the
math module methods should be used.
2021-04-23 11:53:00 -07:00
KIU Shueng Chuan
fbc86cd2c5 use Format_RGB32 when using QImage as paint device
this allows sub-pixel font antialiasing to take place.
2021-04-23 18:54:21 +08:00
Ogi Moore
a9161e0794
Merge pull request #1735 from pijyoi/fix_dpr
unify _dpiRatio() and devicePixelRatio()
2021-04-22 09:52:09 -07:00
Ogi Moore
9a77c223f0
Merge pull request #1736 from pijyoi/remote_dpr
be hidpi-aware for remote rendering
2021-04-22 09:51:19 -07:00
KIU Shueng Chuan
51871cd01e be hidpi-aware for remote rendering 2021-04-22 17:26:46 +08:00
KIU Shueng Chuan
f4ed46773f unify _dpiRatio() and devicePixelRatio() 2021-04-22 11:51:10 +08:00
Ogi Moore
ec4d613037
Merge pull request #1730 from pijyoi/fix_powershell 2021-04-21 07:02:28 -07:00
Martin Chase
d531a808e1
allow gradient position to be configured on a histogram (#1729)
* NEW features for HistgramLUTItem

* gradientPosition=('left', 'right')
* only paint if item is visible (is faster)
* link hisogram to other histograms

* fixes to be able to merge

 * drop linkHistogram (rgba needs to be better integrated)
 * make sure defaults to same as current behavior
 * draw connecting lines correctly on each side
 * add example use
2021-04-20 19:57:15 -07:00
KIU Shueng Chuan
0781f9392b use Popen instead of os.spawnle 2021-04-21 07:31:03 +08:00
Nils Nemitz
a6f9a2be12
ColorMap: keep RGBA values as uint8, clean up docstrings (#1722)
* keep RGBA values as uint8, clean up docstrings

* ColorMap docstring correction

* enum mapping fix 2
2021-04-19 23:03:44 -07:00
Ogi Moore
c62e51f4d8
Merge pull request #1723 from NilsNemitz/fixed_data_ordering_for_colorbaritem
Set fixed data ordering for ColorBarItem
2021-04-17 08:00:56 -07:00
Nils Nemitz
515ae5f6e3 add axisOrder='col-major' 2021-04-17 18:18:14 +09:00
Ogi Moore
2b2b8d34c2
Merge pull request #1716 from j9ac9k/cleanup-pytest-opts
Update pytest and tox configs, fix misc warnings
2021-04-16 22:52:27 -07:00
Ogi Moore
1326ebe2f4 Update numpy version used in CI from 1.19 to 1.20 2021-04-16 22:33:59 -07:00
Ogi Moore
41eadd678b Remove build docs CI job
Now that readthedocs supports building docs on pull requests, we no
longer need to build the docs ourselves as part of the CI pipeline.
2021-04-16 22:32:14 -07:00
Ogi Moore
7740de4a26 Update README table show not-supported configs 2021-04-16 22:18:11 -07:00
Ogi Moore
a231c9ffb0 Update tox.ini config 2021-04-16 22:18:11 -07:00
Ogi Moore
342fbb053f Avoid implicit int conversion for mouse buttons 2021-04-15 22:50:50 -07:00
Ogi Moore
52de9554bb Emit warning about pyside2 bug preventing loading 2021-04-15 22:50:16 -07:00
Ogi Moore
e735d2d9b8 Block pyopenGL tests on more macOS platforms
When running on macOS Big Sur, pyopenGL is unable to find the bindings

Previously this was assumed that it would be fixed in later versions
of Python 3.8, but that has not happened.
2021-04-15 22:08:50 -07:00
Ogi Moore
435c54d20b Adjust pytest.ini warning suppressions
Show standard library Deprecation and PendingDeprecation warnings
Remove warning filters used for older Qt bindings no longer supported
2021-04-15 21:09:11 -07:00